GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

SALTY:OMPC

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720). (99287)
Gene Name(s) ompC
Protein Name(s) Outer membrane protein C

Porin OmpC

External Links
UniProt P0A263
EMBL AF039309
AE006468
M31424
PIR A59139
RefSeq NP_461210.1
ProteinModelPortal P0A263
SMR P0A263
STRING 99287.STM2267
PaxDb P0A263
PRIDE P0A263
EnsemblBacteria AAL21169
GeneID 1253789
KEGG stm:STM2267
PATRIC 32383143
eggNOG COG3203
HOGENOM HOG000272406
KO K09475
OMA RTDEQNN
OrthoDB EOG65J4ZQ
PhylomeDB P0A263
BioCyc SENT99287:GCTI-2281-MONOMER
Proteomes UP000001014
GO GO:0009279
GO:0046930
GO:0015288
GO:0006811
Gene3D 2.40.160.10
InterPro IPR023614
IPR001897
IPR001702
IPR013793
Pfam PF00267
PRINTS PR00183
PR00182
PROSITE PS00576

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0031230

intrinsic to cell outer membrane

PMID:20149234[1]

ECO:0000314

C

Additional File 1

complete

enables

GO:0015288

porin activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001702
InterPro:IPR001897

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001702
InterPro:IPR001897

C

Seeded From UniProt

complete

involved_in

GO:0055085

transmembrane transport

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001702
InterPro:IPR001897

P

Seeded From UniProt

complete

part_of

GO:0009279

cell outer membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0998
UniProtKB-SubCell:SL-0040

C

Seeded From UniProt

complete

involved_in

GO:0006811

ion transport

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0406

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

enables

GO:0015288

porin activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0626

F

Seeded From UniProt

complete

part_of

GO:0046930

pore complex

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0626

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Chooneea, D et al. (2010) Elucidation of the outer membrane proteome of Salmonella enterica serovar Typhimurium utilising a lipid-based protein immobilization technique. BMC Microbiol. 10 44 PubMed GONUTS page