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SALTY:OMPA
Contents
Species (Taxon ID) | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720). (99287) | |
Gene Name(s) | ompA | |
Protein Name(s) | Outer membrane protein A
Outer membrane major heat-modifiable protein Outer membrane protein 33K | |
External Links | ||
UniProt | P02936 | |
EMBL | X02006 AE006468 | |
PIR | A03436 | |
RefSeq | NP_460044.1 | |
ProteinModelPortal | P02936 | |
SMR | P02936 | |
STRING | 99287.STM1070 | |
PaxDb | P02936 | |
PRIDE | P02936 | |
EnsemblBacteria | AAL20003 | |
GeneID | 1252588 | |
KEGG | stm:STM1070 | |
PATRIC | 32380577 | |
eggNOG | COG2885 | |
HOGENOM | HOG000274199 | |
KO | K03286 | |
OMA | EYALTKN | |
OrthoDB | EOG6PP9QB | |
PhylomeDB | P02936 | |
BioCyc | SENT99287:GCTI-1079-MONOMER | |
Proteomes | UP000001014 | |
GO | GO:0009279 GO:0046930 GO:0015288 GO:0005198 GO:0000746 GO:0006811 | |
Gene3D | 2.40.160.20 3.30.1330.60 | |
InterPro | IPR011250 IPR006664 IPR002368 IPR006690 IPR000498 IPR006665 | |
Pfam | PF00691 PF01389 | |
PRINTS | PR01021 PR01022 | |
SUPFAM | SSF103088 SSF56925 | |
PROSITE | PS01068 PS51123 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0009279 |
cell outer membrane |
ECO:0000314 |
C |
Additional file 2: Comparison of the outer membrane proteins identified |
complete | |||||
part_of |
GO:0009279 |
cell outer membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10669 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0055085 |
transmembrane transport |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0015288 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0005198 |
structural molecule activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0009279 |
cell outer membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000498 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000498 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006811 |
ion transport |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0009279 |
cell outer membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000746 |
conjugation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0015288 |
porin activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0046930 |
pore complex |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Chooneea, D et al. (2010) Elucidation of the outer membrane proteome of Salmonella enterica serovar Typhimurium utilising a lipid-based protein immobilization technique. BMC Microbiol. 10 44 PubMed GONUTS page
- ↑ Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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