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SALTY:LPTE
Contents
| Species (Taxon ID) | Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720). (99287) | |
| Gene Name(s) | lptE (ECO:0000255 with HAMAP-Rule:MF_01186) (synonyms: rlpB) | |
| Protein Name(s) | LPS-assembly lipoprotein LptE (ECO:0000255 with HAMAP-Rule:MF_01186) | |
| External Links | ||
| UniProt | Q8ZQZ7 | |
| EMBL | AE006468 | |
| RefSeq | NP_459639.1 | |
| PDB | 4N4R | |
| PDBsum | 4N4R | |
| ProteinModelPortal | Q8ZQZ7 | |
| DIP | DIP-61033N | |
| STRING | 99287.STM0647 | |
| PaxDb | Q8ZQZ7 | |
| PRIDE | Q8ZQZ7 | |
| DNASU | 1252167 | |
| EnsemblBacteria | AAL19598 | |
| GeneID | 1252167 | |
| KEGG | stm:STM0647 | |
| PATRIC | 32379647 | |
| eggNOG | COG2980 | |
| HOGENOM | HOG000256192 | |
| KO | K03643 | |
| OMA | TAGCGFH | |
| OrthoDB | EOG67DPND | |
| PhylomeDB | Q8ZQZ7 | |
| BioCyc | SENT99287:GCTI-650-MONOMER | |
| Proteomes | UP000001014 | |
| GO | GO:0009279 GO:0043165 | |
| HAMAP | MF_01186 | |
| InterPro | IPR007485 | |
| Pfam | PF04390 | |
| PROSITE | PS51257 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0009279 |
cell outer membrane |
ECO:0000314 |
C |
Additional file 2: Comparison of the outer membrane proteins identified |
complete | |||||
| GO:0009279 |
cell outer membrane |
ECO:0000315 |
C |
Fig. 2 cells grown in absence of LptE showing phenotypic mutation in the outer membrane |
complete | |||||
|
involved_in |
GO:0043165 |
Gram-negative-bacterium-type cell outer membrane assembly |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10855 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0015920 |
lipopolysaccharide transport |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10855 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0009279 |
cell outer membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10855 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0001530 |
lipopolysaccharide binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10855 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0019867 |
outer membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0043165 |
Gram-negative-bacterium-type cell outer membrane assembly |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009279 |
cell outer membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000068665 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0043165 |
Gram-negative-bacterium-type cell outer membrane assembly |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000068665 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0009279 |
cell outer membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Chooneea, D et al. (2010) Elucidation of the outer membrane proteome of Salmonella enterica serovar Typhimurium utilising a lipid-based protein immobilization technique. BMC Microbiol. 10 44 PubMed GONUTS page
- ↑ Sperandeo, P et al. (2008) Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli. J. Bacteriol. 190 4460-9 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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