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RAT:SMS
Contents
| Species (Taxon ID) | Rattus norvegicus (Rat). (10116) | |
| Gene Name(s) | Sst (synonyms: Smst) | |
| Protein Name(s) | Somatostatin
Antrin Somatostatin-28 Somatostatin-14 | |
| External Links | ||
| UniProt | P60042 | |
| EMBL | K02248 V01271 J00787 M25890 J00788 | |
| PIR | A20983 | |
| RefSeq | NP_036791.1 | |
| UniGene | Rn.34418 | |
| ProteinModelPortal | P60042 | |
| BindingDB | P60042 | |
| PaxDb | P60042 | |
| Ensembl | ENSRNOT00000002519 | |
| GeneID | 24797 | |
| KEGG | rno:24797 | |
| UCSC | RGD:3761 | |
| CTD | 6750 | |
| RGD | 3761 | |
| eggNOG | NOG44503 | |
| GeneTree | ENSGT00510000047914 | |
| HOGENOM | HOG000036630 | |
| HOVERGEN | HBG017816 | |
| InParanoid | P60042 | |
| KO | K05237 | |
| OMA | RMELQRS | |
| OrthoDB | EOG7H4DXK | |
| PhylomeDB | P60042 | |
| TreeFam | TF333185 | |
| Reactome | REACT_233455 REACT_250028 | |
| NextBio | 604448 | |
| PMAP-CutDB | P60042 | |
| PRO | PR:P60042 | |
| Proteomes | UP000002494 | |
| Genevestigator | P60042 | |
| GO | GO:0005615 GO:0043025 GO:0005179 GO:0006972 GO:0030334 GO:0010447 GO:0043200 GO:0042493 GO:0009408 GO:0010243 GO:0048545 | |
| InterPro | IPR004250 IPR018142 | |
| PANTHER | PTHR10558 | |
| Pfam | PF03002 | |
| PIRSF | PIRSF001814 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0005179 |
hormone activity |
ECO:0000314 |
F |
Figure 2 shows the specific nucleotides used for transcribing the gene somatostatin within the rat's DNA, so that it can later be used as a regulator of both pancreatic and gastrointestinal hormones. |
complete | |||||
|
involved_in |
GO:0048545 |
response to steroid hormone |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0043200 |
response to amino acid |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0043025 |
neuronal cell body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0042493 |
response to drug |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010447 |
response to acidic pH |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010243 |
response to organonitrogen compound |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009408 |
response to heat |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006972 |
hyperosmotic response |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005615 |
extracellular space |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0030334 |
regulation of cell migration |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:98326 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005615 |
extracellular space |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:98326 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0010469 |
regulation of signaling receptor activity |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0005179 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0010469 |
regulation of signaling receptor activity |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0005179 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0010469 |
regulation of signaling receptor activity |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0005179 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0030334 |
regulation of cell migration |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P60041 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005615 |
extracellular space |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P60041 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0005179 |
hormone activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005576 |
extracellular region |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005179 |
hormone activity |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005179 |
hormone activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005576 |
extracellular region |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Goodman, RH et al. (1982) Somatostatin-28 encoded in a cloned cDNA obtained from a rat medullary thyroid carcinoma. J. Biol. Chem. 257 1156-9 PubMed GONUTS page
- ↑ Van Vugt, HH et al. (2008) Somatostatin in the rat periventricular nucleus: sex differences and effect of gonadal steroids. Exp Brain Res 188 483-91 PubMed GONUTS page
- ↑ 3.0 3.1 Kiagiadaki, F et al. (2008) Dopamine (D1) receptor activation and nitrinergic agents influence somatostatin levels in rat retina. Exp. Eye Res. 86 18-24 PubMed GONUTS page
- ↑ Kowiański, P et al. (2008) NPY-, SOM- and VIP-containing interneurons in postnatal development of the rat claustrum. Brain Res. Bull. 76 565-71 PubMed GONUTS page
- ↑ Pallis, E et al. (2009) Antidepressants influence somatostatin levels and receptor pharmacology in brain. Neuropsychopharmacology 34 952-63 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 Rudholm, T et al. (2009) Release of regulatory gut peptides somatostatin, neurotensin and vasoactive intestinal peptide by acid and hyperosmolal solutions in the intestine in conscious rats. Regul. Pept. 152 8-12 PubMed GONUTS page
- ↑ Guo, X et al. (2008) [Effect of rheum on gastrointestinal hormones in rats with severe scald injury]. Zhonghua Shao Shang Za Zhi 24 111-3 PubMed GONUTS page
- ↑ 8.0 8.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Hayes, TE & Dixon, JE (1985) Z-DNA in the rat somatostatin gene. J. Biol. Chem. 260 8145-56 PubMed GONUTS page
e
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r
- Rattus
- Rattus norvegicus
- GO:0030334 ! regulation of cell migration
- GO:0010469 ! regulation of signaling receptor activity
- GO:0010447 ! response to acidic pH
- GO:0043200 ! response to amino acid
- GO:0010243 ! response to organonitrogen compound
- GO:0048545 ! response to steroid hormone
- GO:0009408 ! response to heat
- GO:0042493 ! response to drug
- Rodentia
