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RAT:SLIT3
Contents
| Species (Taxon ID) | Rattus norvegicus (Rat). (10116) | |
| Gene Name(s) | Slit3 (synonyms: Megf5) | |
| Protein Name(s) | Slit homolog 3 protein
Slit-3 Multiple epidermal growth factor-like domains protein 5 Multiple EGF-like domains protein 5 | |
| External Links | ||
| UniProt | O88280 | |
| EMBL | AB011531 | |
| PIR | T13953 | |
| RefSeq | NP_112611.1 | |
| UniGene | Rn.12298 | |
| ProteinModelPortal | O88280 | |
| SMR | O88280 | |
| IntAct | O88280 | |
| STRING | 10116.ENSRNOP00000009714 | |
| PaxDb | O88280 | |
| PRIDE | O88280 | |
| GeneID | 83467 | |
| KEGG | rno:83467 | |
| UCSC | RGD:69311 | |
| CTD | 6586 | |
| RGD | 69311 | |
| eggNOG | COG4886 | |
| HOGENOM | HOG000116120 | |
| HOVERGEN | HBG057959 | |
| InParanoid | O88280 | |
| KO | K06850 | |
| PhylomeDB | O88280 | |
| NextBio | 615863 | |
| PRO | PR:O88280 | |
| Proteomes | UP000002494 | |
| Genevestigator | O88280 | |
| GO | GO:0005576 GO:0016020 GO:0005509 GO:0007420 GO:0030154 GO:0021510 | |
| Gene3D | 2.60.120.200 | |
| InterPro | IPR013320 IPR000483 IPR006207 IPR000742 IPR001881 IPR013032 IPR000152 IPR018097 IPR009030 IPR001791 IPR001611 IPR003591 IPR000372 | |
| Pfam | PF00008 PF12661 PF02210 PF13855 PF01463 PF01462 | |
| SMART | SM00041 SM00181 SM00179 SM00282 SM00369 SM00082 SM00013 | |
| SUPFAM | SSF49899 SSF57184 | |
| PROSITE | PS01185 PS01225 PS00022 PS01186 PS50026 PS01187 PS50025 PS51450 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0005624 |
membrane fraction |
ECO:0000315 |
C |
Source: RGD |
Missing: reference | |||||
| GO:0005739 |
mitochondrion |
ECO:0000315 |
C |
Source: RGD |
Missing: reference | |||||
| GO:0007420 |
brain development |
ECO:0000270 |
P |
complete | ||||||
| GO:0021510 |
spinal cord development |
ECO:0000270 |
P |
complete | ||||||
| GO:0003674 |
molecular function |
ECO:0000307 |
F |
Missing: reference | ||||||
|
involved_in |
GO:0021510 |
spinal cord development |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007420 |
brain development |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
colocalizes_with |
GO:0005739 |
mitochondrion |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003674 |
molecular_function |
ECO:0000307 |
no biological data found used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005509 |
calcium ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0030154 |
cell differentiation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005576 |
extracellular region |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007275 |
multicellular organism development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007399 |
nervous system development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Marillat, V et al. (2002) Spatiotemporal expression patterns of slit and robo genes in the rat brain. J. Comp. Neurol. 442 130-55 PubMed GONUTS page
- ↑ 2.0 2.1 Brose, K et al. (1999) Slit proteins bind Robo receptors and have an evolutionarily conserved role in repulsive axon guidance. Cell 96 795-806 PubMed GONUTS page
- ↑ 3.0 3.1 Little, MH et al. (2001) Dual trafficking of Slit3 to mitochondria and cell surface demonstrates novel localization for Slit protein. Am. J. Physiol., Cell Physiol. 281 C486-95 PubMed GONUTS page
