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RAT:SHAN2
Contents
Species (Taxon ID) | Rattus norvegicus (Rat). (10116) | |
Gene Name(s) | Shank2 (synonyms: Cortbp1) | |
Protein Name(s) | SH3 and multiple ankyrin repeat domains protein 2
Shank2 Cortactin-binding protein 1 CortBP1 GKAP/SAPAP-interacting protein Proline-rich synapse-associated protein 1 ProSAP1 SPANK-3 | |
External Links | ||
UniProt | Q9QX74 | |
EMBL | AF060116 AJ249562 AJ131899 AJ131899 AJ131899 AY298755 AF141903 AF159048 | |
PIR | T14272 | |
RefSeq | NP_001004133.1 NP_597684.1 NP_597685.1 NP_958738.1 | |
UniGene | Rn.14545 | |
ProteinModelPortal | Q9QX74 | |
SMR | Q9QX74 | |
BioGrid | 251104 | |
IntAct | Q9QX74 | |
MINT | MINT-143507 | |
PhosphoSite | Q9QX74 | |
PaxDb | Q9QX74 | |
PRIDE | Q9QX74 | |
GeneID | 171093 | |
KEGG | rno:171093 | |
UCSC | RGD:628772 | |
CTD | 22941 | |
RGD | 628772 | |
eggNOG | COG0666 | |
HOVERGEN | HBG054027 | |
InParanoid | Q9QX74 | |
KO | K15009 | |
NextBio | 621752 | |
PRO | PR:Q9QX74 | |
Proteomes | UP000002494 | |
Genevestigator | Q9QX74 | |
GO | GO:0016324 GO:0031526 GO:0030054 GO:0060170 GO:0005737 GO:0043197 GO:0030426 GO:0043005 GO:0043025 GO:0001917 GO:0001750 GO:0005886 GO:0014069 GO:0045211 GO:0035255 GO:0008022 GO:0017124 GO:0030534 GO:0007420 GO:0035640 GO:0007612 GO:0060292 GO:0060291 GO:0007613 GO:0007584 GO:0035176 GO:0007416 GO:0071625 | |
Gene3D | 1.10.150.50 2.30.42.10 | |
InterPro | IPR001478 IPR001660 IPR013761 IPR021129 IPR011511 IPR001452 | |
Pfam | PF00595 PF00536 PF07653 | |
SMART | SM00228 SM00454 SM00326 | |
SUPFAM | SSF47769 SSF50044 SSF50156 | |
PROSITE | PS50106 PS50105 PS50002 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0060170 |
cilium membrane |
ECO:0000314 |
C |
Subcellular fractionation, Figure 4 A and B showed from cilia fraction Shank2 located at the cilia membrane |
complete | |||||
involved_in |
GO:0099562 |
maintenance of postsynaptic density structure |
ECO:0000305 |
curator inference used in manual assertion |
GO:0005515,GO:0014069 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0098919 |
structural constituent of postsynaptic density |
ECO:0000305 |
curator inference used in manual assertion |
GO:0005515,GO:0014069 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0002609) |
Seeded From UniProt |
complete | ||
part_of |
GO:0060170 |
ciliary membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071625 |
vocalization behavior |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0060292 |
long-term synaptic depression |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0060291 |
long-term synaptic potentiation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0060170 |
ciliary membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
colocalizes_with |
GO:0045211 |
postsynaptic membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043197 |
dendritic spine |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043005 |
neuron projection |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
part_of:(CL:0002608) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035640 |
exploration behavior |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0035255 |
ionotropic glutamate receptor binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035176 |
social behavior |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030534 |
adult behavior |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
colocalizes_with |
GO:0008328 |
ionotropic glutamate receptor complex |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007613 |
memory |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007612 |
learning |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007416 |
synapse assembly |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
colocalizes_with |
GO:0005883 |
neurofilament |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0001917 |
photoreceptor inner segment |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0001750 |
photoreceptor outer segment |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016324 |
apical plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0098978 |
glutamatergic synapse |
ECO:0006063 |
over expression analysis evidence used in manual assertion |
C |
part_of:(UBERON:0002421) |
Seeded From UniProt |
complete | ||
part_of |
GO:0098978 |
glutamatergic synapse |
ECO:0006052 |
RNAi evidence used in manual assertion |
C |
part_of:(UBERON:0002421) |
Seeded From UniProt |
complete | ||
part_of |
GO:0098978 |
glutamatergic synapse |
ECO:0006003 |
electron microscopy evidence used in manual assertion |
C |
part_of:(UBERON:0002421) |
Seeded From UniProt |
complete | ||
part_of |
GO:0098978 |
glutamatergic synapse |
ECO:0006003 |
electron microscopy evidence used in manual assertion |
C |
part_of:(UBERON:0002421) |
Seeded From UniProt |
complete | ||
part_of |
GO:0098978 |
glutamatergic synapse |
ECO:0005589 |
confocal microscopy evidence used in manual assertion |
C |
part_of:(UBERON:0002421) |
Seeded From UniProt |
complete | ||
part_of |
GO:0098978 |
glutamatergic synapse |
ECO:0005589 |
confocal microscopy evidence used in manual assertion |
C |
part_of:(UBERON:0002421) |
Seeded From UniProt |
complete | ||
enables |
GO:0098919 |
structural constituent of postsynaptic density |
ECO:0006063 |
over expression analysis evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
enables |
GO:0098919 |
structural constituent of postsynaptic density |
ECO:0006052 |
RNAi evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
enables |
GO:0098919 |
structural constituent of postsynaptic density |
ECO:0006003 |
electron microscopy evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
enables |
GO:0098919 |
structural constituent of postsynaptic density |
ECO:0005589 |
confocal microscopy evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0098686 |
hippocampal mossy fiber to CA3 synapse |
ECO:0006003 |
electron microscopy evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0098686 |
hippocampal mossy fiber to CA3 synapse |
ECO:0005589 |
confocal microscopy evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050807 |
regulation of synapse organization |
ECO:0006063 |
over expression analysis evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0050807 |
regulation of synapse organization |
ECO:0006052 |
RNAi evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0050807 |
regulation of synapse organization |
ECO:0006003 |
electron microscopy evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0050807 |
regulation of synapse organization |
ECO:0005589 |
confocal microscopy evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0032279 |
asymmetric synapse |
ECO:0006003 |
electron microscopy evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0032279 |
asymmetric synapse |
ECO:0005589 |
confocal microscopy evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0006003 |
electron microscopy evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0006003 |
electron microscopy evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0005589 |
confocal microscopy evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0005589 |
confocal microscopy evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0043025 |
neuronal cell body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0031526 |
brush border membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030426 |
growth cone |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0017124 |
SH3 domain binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
RGD:70941 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0008022 |
protein C-terminus binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
RGD:3708 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0008022 |
protein C-terminus binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
RGD:620768 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007584 |
response to nutrient |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007420 |
brain development |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000463 |
positive regulation of excitatory postsynaptic potential |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:2000311 |
regulation of AMPA receptor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:3613677 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0097107 |
postsynaptic density assembly |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060999 |
positive regulation of dendritic spine development |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060997 |
dendritic spine morphogenesis |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060291 |
long-term synaptic potentiation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051968 |
positive regulation of synaptic transmission, glutamatergic |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051124 |
synaptic growth at neuromuscular junction |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0040752 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048854 |
brain morphogenesis |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
colocalizes_with |
GO:0045211 |
postsynaptic membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:2671987 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0044309 |
neuron spine |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0043197 |
dendritic spine |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:2671987 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0043005 |
neuron projection |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0035255 |
ionotropic glutamate receptor binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0030425 |
dendrite |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:3613677 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0030160 |
GKAP/Homer scaffold activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:3613677 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0030159 |
receptor signaling complex scaffold activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001191878 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0040752 |
C |
Seeded From UniProt |
complete | ||
colocalizes_with |
GO:0008328 |
ionotropic glutamate receptor complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:2671987 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007416 |
synapse assembly |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1930016 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0048786 |
presynaptic active zone |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0045202 |
synapse |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0045211 |
postsynaptic membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0042995 |
cell projection |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030054 |
cell junction |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0017124 |
SH3 domain binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043197 |
dendritic spine |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016324 |
apical plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030426 |
growth cone |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Saavedra, MV et al. (2008) Scaffolding proteins in highly purified rat olfactory cilia membranes. Neuroreport 19 1123-6 PubMed GONUTS page
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 Boeckers, TM et al. (1999) Proline-rich synapse-associated protein-1/cortactin binding protein 1 (ProSAP1/CortBP1) is a PDZ-domain protein highly enriched in the postsynaptic density. J. Neurosci. 19 6506-18 PubMed GONUTS page
- ↑ Lee, JH et al. (2007) Dynamic regulation of cystic fibrosis transmembrane conductance regulator by competitive interactions of molecular adaptors. J. Biol. Chem. 282 10414-22 PubMed GONUTS page
- ↑ 4.00 4.01 4.02 4.03 4.04 4.05 4.06 4.07 4.08 4.09 4.10 4.11 Grabrucker, AM et al. (2011) Concerted action of zinc and ProSAP/Shank in synaptogenesis and synapse maturation. EMBO J. 30 569-81 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 Tobaben, S et al. (2000) The G protein-coupled receptor CL1 interacts directly with proteins of the Shank family. J. Biol. Chem. 275 36204-10 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 McWilliams, RR et al. (2005) Shank2E binds NaP(i) cotransporter at the apical membrane of proximal tubule cells. Am. J. Physiol., Cell Physiol. 289 C1042-51 PubMed GONUTS page
- ↑ 7.0 7.1 Qualmann, B et al. (2004) Linkage of the actin cytoskeleton to the postsynaptic density via direct interactions of Abp1 with the ProSAP/Shank family. J. Neurosci. 24 2481-95 PubMed GONUTS page
- ↑ Baron, MK et al. (2006) An architectural framework that may lie at the core of the postsynaptic density. Science 311 531-5 PubMed GONUTS page
- ↑ Kreienkamp, HJ et al. (2000) The calcium-independent receptor for alpha-latrotoxin from human and rodent brains interacts with members of the ProSAP/SSTRIP/Shank family of multidomain proteins. J. Biol. Chem. 275 32387-90 PubMed GONUTS page
- ↑ 10.00 10.01 10.02 10.03 10.04 10.05 10.06 10.07 10.08 10.09 10.10 10.11 10.12 10.13 10.14 10.15 10.16 10.17 10.18 10.19 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Yang, J et al. (2011) DGKι regulates presynaptic release during mGluR-dependent LTD. EMBO J. 30 165-80 PubMed GONUTS page
b
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m
n
p
- GO:0001750 ! photoreceptor outer segment
- GO:0001917 ! photoreceptor inner segment
- GO:0005886 ! plasma membrane
- GO:2000463 ! positive regulation of excitatory postsynaptic potential
- GO:0060999 ! positive regulation of dendritic spine development
- GO:0051968 ! positive regulation of synaptic transmission, glutamatergic
- GO:0014069 ! postsynaptic density
- GO:0097107 ! postsynaptic density assembly
- GO:0045211 ! postsynaptic membrane
- GO:0048786 ! presynaptic active zone
- GO:0005515 ! protein binding
r
s
- Sciurognathi
- GO:0017124 ! SH3 domain binding
- GO:0030159 ! signaling receptor complex adaptor activity
- GO:0035176 ! social behavior
- GO:0098919 ! structural constituent of postsynaptic density
- GO:0045202 ! synapse
- GO:0007416 ! synapse assembly
- GO:0051124 ! synaptic assembly at neuromuscular junction
- GO:0030160 ! synaptic receptor adaptor activity