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RAT:Q5NUI3

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Species (Taxon ID) Rattus norvegicus (Rat). (10116)
Gene Name(s) No Information Provided. (synonyms: Cad19 (ECO:0000313 with EMBL:BAD80717.1))
Protein Name(s) Cadherin19 (ECO:0000313 with EMBL:BAD80717.1)

Protein Cdh19 (ECO:0000313 with Ensembl:ENSRNOP00000047360)

External Links
UniProt Q5NUI3
EMBL AABR06073985
AABR06073986
AABR06073987
AB121032
RefSeq NP_001009448.1
XP_006249715.1
UniGene Rn.34446
STRING 10116.ENSRNOP00000047360
Ensembl ENSRNOT00000044628
GeneID 360835
KEGG rno:360835
UCSC RGD:1307169
CTD 28513
RGD 1307169
eggNOG NOG287616
GeneTree ENSGT00760000118954
HOGENOM HOG000231252
HOVERGEN HBG005217
KO K06806
OMA SAIFRKF
OrthoDB EOG79CXXW
PhylomeDB Q5NUI3
TreeFam TF329887
NextBio 674296
PRO PR:Q5NUI3
Proteomes UP000002494
Genevestigator Q5NUI3
GO GO:0016021
GO:0005886
GO:0005509
GO:0007156
Gene3D 2.60.40.60
4.10.900.10
InterPro IPR002126
IPR015919
IPR020894
IPR000233
IPR027397
Pfam PF00028
PF01049
PRINTS PR00205
SMART SM00112
SUPFAM SSF49313
PROSITE PS00232
PS50268

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0045296

cadherin binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000616280
UniProtKB:P10288
UniProtKB:P55290

F

Seeded From UniProt

complete

involved_in

GO:0044331

cell-cell adhesion mediated by cadherin

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:88355
PANTHER:PTN000616280
UniProtKB:P10288

P

Seeded From UniProt

complete

enables

GO:0042803

protein homodimerization activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:99551
PANTHER:PTN000616280

F

Seeded From UniProt

complete

involved_in

GO:0034332

adherens junction organization

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000616280
UniProtKB:P12830
ZFIN:ZDB-GENE-990415-171

P

Seeded From UniProt

complete

part_of

GO:0016342

catenin complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:88354
PANTHER:PTN000616280
UniProtKB:P12830
UniProtKB:P19022
ZFIN:ZDB-GENE-990415-171

C

Seeded From UniProt

complete

involved_in

GO:0016339

calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1095414
MGI:MGI:88354
MGI:MGI:88355
PANTHER:PTN000616280
RGD:2321
RGD:69280
UniProtKB:P55290

P

Seeded From UniProt

complete

part_of

GO:0009986

cell surface

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1095414
MGI:MGI:88354
MGI:MGI:88355
PANTHER:PTN000616280
UniProtKB:P10288
UniProtKB:P33150
UniProtKB:P33151

C

Seeded From UniProt

complete

enables

GO:0008092

cytoskeletal protein binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:88354
PANTHER:PTN000616280

F

Seeded From UniProt

complete

involved_in

GO:0007156

homophilic cell adhesion via plasma membrane adhesion molecules

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1095414
MGI:MGI:88355
MGI:MGI:99218
PANTHER:PTN000616280
UniProtKB:P55290

P

Seeded From UniProt

complete

involved_in

GO:0007043

cell-cell junction assembly

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000616280
UniProtKB:P33151

P

Seeded From UniProt

complete

part_of

GO:0005913

cell-cell adherens junction

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:105057
MGI:MGI:88354
MGI:MGI:88356
PANTHER:PTN000616280
RGD:69280
UniProtKB:P10288
UniProtKB:P12830
UniProtKB:P19022
UniProtKB:P33151

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:105057
MGI:MGI:107435
MGI:MGI:1095414
MGI:MGI:88354
MGI:MGI:88355
MGI:MGI:88356
MGI:MGI:99217
MGI:MGI:99551
PANTHER:PTN000616280
RGD:619745
RGD:621089
RGD:69279
RGD:69280
UniProtKB:O93319
UniProtKB:P10288
UniProtKB:P12830
UniProtKB:P19022
UniProtKB:P22223
UniProtKB:P33151
UniProtKB:P55283
UniProtKB:P55290
UniProtKB:Q6ZTQ4
UniProtKB:Q90763
ZFIN:ZDB-GENE-010606-1

C

Seeded From UniProt

complete

enables

GO:0005509

calcium ion binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:88354
PANTHER:PTN000616280
UniProtKB:Q86UP0

F

Seeded From UniProt

complete

involved_in

GO:0000902

cell morphogenesis

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000616280
ZFIN:ZDB-GENE-990415-171

P

Seeded From UniProt

complete

involved_in

GO:0098609

cell-cell adhesion

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:105057
MGI:MGI:88354
MGI:MGI:88356
PANTHER:PTN000616280
RGD:69280
UniProtKB:O93319
UniProtKB:P12830
UniProtKB:Q86UP0

P

Seeded From UniProt

complete

enables

GO:0005509

calcium ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000233
InterPro:IPR002126
InterPro:IPR015919

F

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR020894

C

Seeded From UniProt

complete

involved_in

GO:0007155

cell adhesion

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR020894

P

Seeded From UniProt

complete

involved_in

GO:0007156

homophilic cell adhesion via plasma membrane adhesion molecules

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000233
InterPro:IPR002126

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002126
InterPro:IPR015919

C

Seeded From UniProt

complete

involved_in

GO:0098609

cell-cell adhesion

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR039808

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-1003

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

involved_in

GO:0007155

cell adhesion

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0130

P

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000040

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-SubCell:SL-0039

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 1.13 1.14 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page