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RAT:ATRN
Contents
| Species (Taxon ID) | Rattus norvegicus (Rat). (10116) | |
| Gene Name(s) | Atrn (ECO:0000312 with RGD:69063) | |
| Protein Name(s) | Attractin
Protein zitter | |
| External Links | ||
| UniProt | Q99J86 | |
| EMBL | AB038387 AB038388 AB049248 | |
| RefSeq | NP_112641.1 | |
| UniGene | Rn.53846 | |
| ProteinModelPortal | Q99J86 | |
| STRING | 10116.ENSRNOP00000028847 | |
| PhosphoSite | Q99J86 | |
| PaxDb | Q99J86 | |
| PRIDE | Q99J86 | |
| Ensembl | ENSRNOT00000028847 | |
| GeneID | 83526 | |
| KEGG | rno:83526 | |
| UCSC | RGD:69063 | |
| CTD | 8455 | |
| RGD | 69063 | |
| eggNOG | NOG242225 | |
| GeneTree | ENSGT00390000001118 | |
| HOGENOM | HOG000231727 | |
| HOVERGEN | HBG004312 | |
| InParanoid | Q99J86 | |
| OMA | NPLKGTC | |
| OrthoDB | EOG7D59MM | |
| PhylomeDB | Q99J86 | |
| TreeFam | TF321873 | |
| NextBio | 616013 | |
| Proteomes | UP000002494 | |
| Genevestigator | Q99J86 | |
| GO | GO:0005737 GO:0005615 GO:0070062 GO:0016021 GO:0005886 GO:0030246 GO:0004872 GO:0021549 GO:0006954 GO:0042552 GO:0043473 GO:0040014 GO:0006979 | |
| Gene3D | 2.120.10.80 2.60.120.290 3.10.100.10 | |
| InterPro | IPR001304 IPR016186 IPR016187 IPR000859 IPR000742 IPR013032 IPR002049 IPR015915 IPR006652 IPR016201 IPR002165 | |
| Pfam | PF00431 PF01344 PF00059 PF01437 | |
| SMART | SM00034 SM00042 SM00181 SM00180 SM00423 | |
| SUPFAM | SSF49854 SSF56436 | |
| PROSITE | PS50041 PS01180 PS00022 PS01186 PS50026 PS01248 PS50027 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0043473 |
pigmentation |
ECO:0000315 |
P |
Figure 2 |
complete | |||||
|
involved_in |
GO:0043473 |
pigmentation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005615 |
extracellular space |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006979 |
response to oxidative stress |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003674 |
molecular_function |
ECO:0000307 |
no biological data found used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005615 |
extracellular space |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75882 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0043473 |
pigmentation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9WU60 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0042552 |
myelination |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9WU60 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0040014 |
regulation of multicellular organism growth |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9WU60 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0038023 |
signaling receptor activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9WU60 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0021549 |
cerebellum development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9WU60 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005576 |
extracellular region |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006954 |
inflammatory response |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0030246 |
carbohydrate binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Kuramoto, T et al. (2001) Attractin/mahogany/zitter plays a critical role in myelination of the central nervous system. Proc. Natl. Acad. Sci. U.S.A. 98 559-64 PubMed GONUTS page
- ↑ Muto, Y & Sato, K (2003) Pivotal role of attractin in cell survival under oxidative stress in the zitter rat brain with genetic spongiform encephalopathy. Brain Res. Mol. Brain Res. 111 111-22 PubMed GONUTS page
- ↑ 3.0 3.1 Liu, J & Xiong, C (2004) [Immunohistochemical localization of attractin in the testis and epididymis of mature male rats]. Zhonghua Nan Ke Xue 10 515-7, 520 PubMed GONUTS page
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