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PSESM:HPAB2

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Species (Taxon ID) Pseudomonas syringae pv. tomato (strain DC3000). (223283)
Gene Name(s) hopAB2 (synonyms: avrPtoB)
Protein Name(s) Effector protein HopAB2

Avirulence protein AvrPtoB E3 ubiquitin-protein ligase

External Links
UniProt Q8RSY1
EMBL AY074795
AE016853
RefSeq NP_792881.1
PDB 2FD4
3HGK
3HGL
3TL8
PDBsum 2FD4
3HGK
3HGL
3TL8
ProteinModelPortal Q8RSY1
SMR Q8RSY1
DIP DIP-60253N
STRING 223283.PSPTO_3087
EnsemblBacteria AAO56576
GeneID 1184744
KEGG pst:PSPTO_3087
PATRIC 19997547
eggNOG NOG12793
HOGENOM HOG000112938
KO K13452
OMA VAFSRVE
OrthoDB EOG6384HK
BioCyc PSYR223283:GJIX-3135-MONOMER
EvolutionaryTrace Q8RSY1
Proteomes UP000002515
GO GO:0005576
GO:0016874
GO:0034053
GO:0052018
GO:0009405
InterPro IPR015133
Pfam PF09046

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0009405

pathogenesis

PMID:16792692[1]

ECO:0000315

P

Fig1. AvrPtoB inserted into vectors shows strong pathogenic response on bean and Arabidopsis compared to the empty vector control which only shows the hypersensitive response. Also the truncation of AvrPtoB from the c-terminus in different constructs leads to the eventual loss of pathogenesis on bean and Arabidopsis (1. b, c)

complete
CACAO 4246

involved_in

GO:0009405

pathogenesis

PMID:16792692[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0052018

modulation by symbiont of RNA levels in host

PMID:18703740[2]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005576

extracellular region

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0964
UniProtKB-SubCell:SL-0243

C

Seeded From UniProt

complete

enables

GO:0016740

transferase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0808

F

Seeded From UniProt

complete

involved_in

GO:0034053

modulation by symbiont of host defense-related programmed cell death

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0928

P

Seeded From UniProt

complete

involved_in

GO:0009405

pathogenesis

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0843

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 de Torres, M et al. (2006) Pseudomonas syringae effector AvrPtoB suppresses basal defence in Arabidopsis. Plant J. 47 368-82 PubMed GONUTS page
  2. Navarro, L et al. (2008) Suppression of the microRNA pathway by bacterial effector proteins. Science 321 964-7 PubMed GONUTS page