GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

PSEP1:4HYPE

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Pseudomonas putida (strain F1 / ATCC 700007). (351746)
Gene Name(s) No Information Provided.
Protein Name(s) 4-hydroxyproline 2-epimerase (ECO:0000303 with PMID:24980702[1])

4Hyp 2-epimerase 4HypE (ECO:0000303 with PMID:24980702[1])

External Links
UniProt A5VZY6
EMBL CP000712
RefSeq WP_012051491.1
PDB 4JBD
4JD7
PDBsum 4JBD
4JD7
ProteinModelPortal A5VZY6
SMR A5VZY6
STRING 351746.Pput_1285
EnsemblBacteria ABQ77446
KEGG ppf:Pput_1285
PATRIC 19918625
eggNOG ENOG4105CTU
COG3938
HOGENOM HOG000084335
KO K12658
OMA ATCGVIF
OrthoDB EOG6SNDV3
BioCyc PPUT351746:GI26-1323-MONOMER
Proteomes UP000006553
GO GO:0047580
InterPro IPR008794
Pfam PF05544
PIRSF PIRSF029792

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0047580

4-hydroxyproline epimerase activity

PMID:24980702[1]

ECO:0000314

F

Table 2 contains the kinetic parameters for the reaction, the uniprot ID and the assigned function. (4R-hydroxyproline 2-epimerase is 4HypE) The enzyme is annotated as catalyzing that reaction for which it shows the highest actvity.

complete
CACAO 10179

enables

GO:0047580

4-hydroxyproline epimerase activity

PMID:24980702[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0047580

4-hydroxyproline epimerase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:5.1.1.8

F

Seeded From UniProt

complete

enables

GO:0016853

isomerase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0413

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Zhao, S et al. (2014) Prediction and characterization of enzymatic activities guided by sequence similarity and genome neighborhood networks. Elife 3 PubMed GONUTS page