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PSEAI:Q9KKG5
Contents
| Species (Taxon ID) | Pseudomonas aeruginosa. (287) | |
| Gene Name(s) | No Information Provided. | |
| Protein Name(s) | RNA polymerase-binding transcription factor DksA (ECO:0000256 with HAMAP-Rule:MF_00926) | |
| External Links | ||
| UniProt | Q9KKG5 | |
| EMBL | AF062653 AP014622 AP014646 HG974234 JJOD01000077 JHEU01001152 JMQH01000012 JFJU01000004 JOVK01000001 JPQQ01000017 JMBS01000022 JMBR01000083 | |
| PIR | H83054 | |
| RefSeq | NP_253411.1 | |
| SMR | Q9KKG5 | |
| STRING | 208964.PA4723 | |
| DNASU | 881594 | |
| GeneID | 881594 | |
| KEGG | pae:PA4723 | |
| PATRIC | 19844225 | |
| PseudoCAP | PA4723 | |
| HOGENOM | HOG000178407 | |
| KO | K06204 | |
| OrthoDB | EOG6JDWD6 | |
| GO | GO:0005737 GO:0070063 GO:0008270 GO:0051055 GO:0045861 GO:0045892 GO:1901857 GO:2000679 GO:0006355 | |
| HAMAP | MF_00926 | |
| InterPro | IPR012784 IPR020460 IPR000962 IPR020458 | |
| Pfam | PF01258 | |
| PRINTS | PR00618 | |
| TIGRFAMs | TIGR02420 | |
| PROSITE | PS01102 PS51128 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0006355 |
regulation of transcription, DNA-dependent |
ECO:0000315 |
P |
Figure 4 shows mRNA levels of certain genes are severely reduced in strains that have a plasmid copy of dksA (compare lanes 3 and 4). |
complete | |||||
| GO:0009372 |
quorum sensing |
ECO:0000315 |
P |
Table 3. dksA affect culture density by inhibiting rhlI expression |
complete | |||||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:2000679 |
positive regulation of transcription regulatory region DNA binding |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:1901857 |
positive regulation of cellular respiration |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0070063 |
RNA polymerase binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0051055 |
negative regulation of lipid biosynthetic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0045861 |
negative regulation of proteolysis |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008270 |
zinc ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0046872 |
metal ion binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008270 |
zinc ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000078108 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0010468 |
regulation of gene expression |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000078108 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000078108 |
C |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 Branny, P et al. (2001) Inhibition of quorum sensing by a Pseudomonas aeruginosa dksA homologue. J. Bacteriol. 183 1531-9 PubMed GONUTS page
- ↑ 2.0 2.1 Perron, K et al. (2005) DksA represses ribosomal gene transcription in Pseudomonas aeruginosa by interacting with RNA polymerase on ribosomal promoters. Mol. Microbiol. 56 1087-102 PubMed GONUTS page
- ↑ Platt, MD et al. (2008) Proteomic, microarray, and signature-tagged mutagenesis analyses of anaerobic Pseudomonas aeruginosa at pH 6.5, likely representing chronic, late-stage cystic fibrosis airway conditions. J. Bacteriol. 190 2739-58 PubMed GONUTS page
- ↑ Blaby-Haas, CE et al. (2011) Role of a Zn-independent DksA in Zn homeostasis and stringent response. Mol. Microbiol. 79 700-15 PubMed GONUTS page
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