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PSEAE:SPEA
Contents
Species (Taxon ID) | Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG12228). (208964) | |
Gene Name(s) | speA (ECO:0000255 with HAMAP-Rule:MF_01417) | |
Protein Name(s) | Biosynthetic arginine decarboxylase (ECO:0000255 with HAMAP-Rule:MF_01417)
ADC (ECO:0000255 with HAMAP-Rule:MF_01417) | |
External Links | ||
UniProt | Q9HUX1 | |
EMBL | AE004091 | |
PIR | H83040 | |
RefSeq | NP_253526.1 | |
ProteinModelPortal | Q9HUX1 | |
SMR | Q9HUX1 | |
STRING | 208964.PA4839 | |
EnsemblBacteria | AAG08224 | |
GeneID | 879594 | |
KEGG | pae:PA4839 | |
PATRIC | 19844477 | |
PseudoCAP | PA4839 | |
eggNOG | COG1166 | |
HOGENOM | HOG000029191 | |
InParanoid | Q9HUX1 | |
KO | K01585 | |
OMA | IDHYVDG | |
OrthoDB | EOG676Z0R | |
PhylomeDB | Q9HUX1 | |
BioCyc | MetaCyc:MONOMER-12 | |
Proteomes | UP000002438 | |
GO | GO:0008792 GO:0046872 GO:0006527 GO:0033388 GO:0008295 | |
Gene3D | 2.40.37.10 3.20.20.10 | |
HAMAP | MF_01417 | |
InterPro | IPR009006 IPR002985 IPR022643 IPR022657 IPR022644 IPR022653 IPR000183 IPR029066 | |
Pfam | PF02784 PF00278 | |
PIRSF | PIRSF001336 | |
PRINTS | PR01180 PR01179 | |
SUPFAM | SSF50621 SSF51419 | |
TIGRFAMs | TIGR01273 | |
PROSITE | PS00878 PS00879 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0008792 |
arginine decarboxylase activity |
ECO:0000315 |
F |
Table 2 shows the formation of arginine decarboxylase (ADC) by the wild-type strain and the speA mutants under different growth conditions. Spe A mutant had lower levels of ADC. |
complete | |||||
enables |
GO:0008792 |
arginine decarboxylase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0033388 |
putrescine biosynthetic process from arginine |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000159940 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0008792 |
arginine decarboxylase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10959 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0033388 |
putrescine biosynthetic process from arginine |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008792 |
arginine decarboxylase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003824 |
catalytic activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006527 |
arginine catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008295 |
spermidine biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008792 |
arginine decarboxylase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0008792 |
arginine decarboxylase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0008792 |
arginine decarboxylase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000076417 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0008295 |
spermidine biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000076417 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006596 |
polyamine biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016831 |
carboxy-lyase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016829 |
lyase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008295 |
spermidine biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Nakada, Y & Itoh, Y (2003) Identification of the putrescine biosynthetic genes in Pseudomonas aeruginosa and characterization of agmatine deiminase and N-carbamoylputrescine amidohydrolase of the arginine decarboxylase pathway. Microbiology (Reading, Engl.) 149 707-14 PubMed GONUTS page
- ↑ 2.0 2.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page