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PSEAE:RHLB
Contents
Species (Taxon ID) | Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG12228). (208964) | |
Gene Name(s) | rhlB (ECO:0000255 with HAMAP-Rule:MF_00661) (synonyms: rhl) | |
Protein Name(s) | ATP-dependent RNA helicase RhlB (ECO:0000255 with HAMAP-Rule:MF_00661) | |
External Links | ||
UniProt | Q9HXE5 | |
EMBL | AE004091 | |
PIR | C83163 | |
RefSeq | NP_252550.3 | |
ProteinModelPortal | Q9HXE5 | |
SMR | Q9HXE5 | |
STRING | 208964.PA3861 | |
EnsemblBacteria | AAG07248 | |
GeneID | 879804 | |
KEGG | pae:PA3861 | |
PATRIC | 19842373 | |
PseudoCAP | PA3861 | |
eggNOG | COG0513 | |
HOGENOM | HOG000268807 | |
InParanoid | Q9HXE5 | |
KO | K03732 | |
OMA | LMHAIYD | |
PhylomeDB | Q9HXE5 | |
Proteomes | UP000002438 | |
GO | GO:0005737 GO:0005524 GO:0004004 GO:0003723 GO:0006401 | |
Gene3D | 3.40.50.300 | |
HAMAP | MF_00661 | |
InterPro | IPR011545 IPR014001 IPR001650 IPR027417 IPR000629 IPR023554 IPR014014 | |
Pfam | PF00270 PF00271 | |
SMART | SM00487 SM00490 | |
SUPFAM | SSF52540 | |
PROSITE | PS00039 PS51192 PS51194 PS51195 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
NOT |
GO:0004004 |
ATP-dependent RNA helicase activity |
ECO:0000314 |
F |
AmpR positively regulates critical QS regulators of the Las system, Rhl system and PQS. Expression of the genes was determined by qPCR. |
complete | ||||
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004004 |
ATP-dependent RNA helicase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000098306 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000098306 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006401 |
RNA catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000098306 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0004004 |
ATP-dependent RNA helicase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000098306 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003723 |
RNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000098306 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0004386 |
helicase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Balasubramanian, D et al. (2014) Deep sequencing analyses expands the Pseudomonas aeruginosa AmpR regulon to include small RNA-mediated regulation of iron acquisition, heat shock and oxidative stress response. Nucleic Acids Res. 42 979-98 PubMed GONUTS page
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