GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
PSEAE:Q9I5D1
Contents
Species (Taxon ID) | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 /JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1). (208964) | |
Gene Name(s) | ampDh3 (ECO:0000313 with EMBL:AAG04196.1) | |
Protein Name(s) | AmpDh3 (ECO:0000313 with EMBL:AAG04196.1) | |
External Links | ||
UniProt | Q9I5D1 | |
EMBL | AE004091 | |
PIR | G83543 | |
RefSeq | NP_249498.1 WP_003114198.1 | |
PDB | 4BXD 4BXE 4BXJ | |
PDBsum | 4BXD 4BXE 4BXJ | |
ProteinModelPortal | Q9I5D1 | |
SMR | Q9I5D1 | |
STRING | 208964.PA0807 | |
PaxDb | Q9I5D1 | |
PRIDE | Q9I5D1 | |
EnsemblBacteria | AAG04196 | |
GeneID | 877713 | |
KEGG | pae:PA0807 | |
PATRIC | 19835894 | |
PseudoCAP | PA0807 | |
eggNOG | ENOG4108VBV COG3023 | |
InParanoid | Q9I5D1 | |
KO | K01447 | |
OMA | VMHYTAI | |
PhylomeDB | Q9I5D1 | |
Proteomes | UP000002438 | |
GO | GO:0009276 GO:0019867 GO:0046872 GO:0008745 GO:0009253 GO:0009254 GO:0033252 | |
CDD | cd06583 | |
Gene3D | 1.10.101.10 3.40.80.10 | |
InterPro | IPR002502 IPR002477 | |
Pfam | PF01510 | |
SMART | SM00644 | |
SUPFAM | SSF47090 SSF55846 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:0019867 |
outer membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG13687 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009254 |
peptidoglycan turnover |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10041 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009253 |
peptidoglycan catabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG13687 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0008745 |
N-acetylmuramoyl-L-alanine amidase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG13687 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0033252 |
regulation of beta-lactamase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0009276 |
Gram-negative-bacterium-type cell wall |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0008745 |
N-acetylmuramoyl-L-alanine amidase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0008745 |
N-acetylmuramoyl-L-alanine amidase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009253 |
peptidoglycan catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Zhang, W et al. (2013) Reactions of the three AmpD enzymes of Pseudomonas aeruginosa. J. Am. Chem. Soc. 135 4950-3 PubMed GONUTS page