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PSEAE:Q9HVQ3
Contents
| Species (Taxon ID) | Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG12228). (208964) | |
| Gene Name(s) | speC (ECO:0000313 with EMBL:AAG07907.1) | |
| Protein Name(s) | Ornithine decarboxylase (ECO:0000313 with EMBL:AAG07907.1) | |
| External Links | ||
| UniProt | Q9HVQ3 | |
| EMBL | AE004091 | |
| PIR | B83080 | |
| RefSeq | NP_253209.1 | |
| ProteinModelPortal | Q9HVQ3 | |
| SMR | Q9HVQ3 | |
| STRING | 208964.PA4519 | |
| EnsemblBacteria | AAG07907 | |
| GeneID | 881118 | |
| KEGG | pae:PA4519 | |
| PATRIC | 19843765 | |
| PseudoCAP | PA4519 | |
| HOGENOM | HOG000274132 | |
| InParanoid | Q9HVQ3 | |
| KO | K01581 | |
| OMA | VFCRILC | |
| OrthoDB | EOG6Z9B18 | |
| PhylomeDB | Q9HVQ3 | |
| Proteomes | UP000002438 | |
| GO | GO:0004586 GO:0033387 | |
| Gene3D | 2.40.37.10 3.20.20.10 | |
| InterPro | IPR009006 IPR022643 IPR022657 IPR022644 IPR022653 IPR000183 IPR002433 IPR029066 | |
| Pfam | PF02784 PF00278 | |
| PRINTS | PR01179 PR01182 | |
| SUPFAM | SSF50621 SSF51419 | |
| PROSITE | PS00878 PS00879 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0006593 |
ornithine catabolic process |
ECO:0000315 |
P |
Table 2 shows the formation of ornithine decarboxylase (ODC) by the wild-type strain and the speC mutants under different growth conditions. Spe C mutants had lower levels of ODC. |
complete | |||||
|
involved_in |
GO:0033387 |
putrescine biosynthetic process from ornithine |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:97402 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:97402 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004586 |
ornithine decarboxylase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:2442093 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0033387 |
putrescine biosynthetic process from ornithine |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004586 |
ornithine decarboxylase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003824 |
catalytic activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000183 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006596 |
polyamine biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Nakada, Y & Itoh, Y (2003) Identification of the putrescine biosynthetic genes in Pseudomonas aeruginosa and characterization of agmatine deiminase and N-carbamoylputrescine amidohydrolase of the arginine decarboxylase pathway. Microbiology (Reading, Engl.) 149 707-14 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
b
