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PSEAE:BEKAS
Contents
Species (Taxon ID) | Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG12228). (208964) | |
Gene Name(s) | No Information Provided. | |
Protein Name(s) | Beta-ketodecanoyl-[acyl-carrier-protein] synthase (ECO:0000305) | |
External Links | ||
UniProt | Q9HYV7 | |
EMBL | AE004091 | |
PIR | E83236 | |
RefSeq | NP_251976.1 WP_003119670.1 | |
ProteinModelPortal | Q9HYV7 | |
SMR | Q9HYV7 | |
STRING | 208964.PA3286 | |
PaxDb | Q9HYV7 | |
EnsemblBacteria | AAG06674 | |
GeneID | 882449 | |
KEGG | pae:PA3286 | |
PATRIC | 19841157 | |
PseudoCAP | PA3286 | |
eggNOG | COG0332 | |
HOGENOM | HOG000246675 | |
InParanoid | Q9HYV7 | |
KO | K16872 | |
OMA | SGTGLYT | |
OrthoDB | EOG6BS8NT | |
PhylomeDB | Q9HYV7 | |
BioCyc | MetaCyc:MONOMER-17586 | |
UniPathway | UPA00094 | |
Proteomes | UP000002438 | |
GO | GO:0004315 GO:0033818 GO:0006633 GO:0042758 | |
Gene3D | 3.40.47.10 | |
InterPro | IPR013751 IPR013747 IPR016039 | |
Pfam | PF08545 PF08541 | |
SUPFAM | SSF53901 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0042758 |
long-chain fatty acid catabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
GO:0061990 |
beta-ketodecanoyl-[acyl-carrier-protein] synthase activity |
ECO:0000315 |
F |
Figure 3: FAME mass spectra indicate a KASIII enzyme condenses C8-CoA with malonyl-ACP to make beta-keto-decanoyl-ACP Figure 4B: ΔfabY in the TMT16 strain (strain in which 4 KASIII domains were deleted) resulted in cell death. The combination of ΔfabY and ΔPA3286 resulted in similar numbers of CFU as that found in the ΔfabY and TMT16 strain. Figure 4C: ΔPA3286 fed perdeuterated C10 did not incorporate deuterated fatty acids and had a mass spectrum almost identical to that of ΔPA3286 fed regular C10. TMT44 (strain complemented with PA3286) had deuterated FAME peaks and a mass spectrum similar to that of the wildtype. |
complete | |||||
enables |
GO:0061990 |
beta-ketodecanoyl-[acyl-carrier-protein] synthase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
GO:0042758 |
long-chain fatty acid catabolic process |
ECO:0000315 |
P |
Figure 5A: Wild-type and ΔPA3286 strains were fed long-chain fatty acids. Only the wild-type strain produced subsequent fatty acids where the terminal 7 carbon atom was fully substituted with deuterium. |
complete | |||||
enables |
GO:0033818 |
beta-ketoacyl-acyl-carrier-protein synthase III activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002147059 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003824 |
catalytic activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004315 |
3-oxoacyl-[acyl-carrier-protein] synthase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006633 |
fatty acid biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016746 |
transferase activity, transferring acyl groups |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006633 |
fatty acid biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00094 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Yuan, Y et al. (2012) Pseudomonas aeruginosa directly shunts β-oxidation degradation intermediates into de novo fatty acid biosynthesis. J. Bacteriol. 194 5185-96 PubMed GONUTS page
- ↑ Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page