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PMID:18405346
| Citation |
David, H, Ozçelik, IS, Hofmann, G and Nielsen, J (2008) Analysis of Aspergillus nidulans metabolism at the genome-scale. BMC Genomics 9:163 |
|---|---|
| Abstract |
Aspergillus nidulans is a member of a diverse group of filamentous fungi, sharing many of the properties of its close relatives with significance in the fields of medicine, agriculture and industry. Furthermore, A. nidulans has been a classical model organism for studies of development biology and gene regulation, and thus it has become one of the best-characterized filamentous fungi. It was the first Aspergillus species to have its genome sequenced, and automated gene prediction tools predicted 9,451 open reading frames (ORFs) in the genome, of which less than 10% were assigned a function. |
| Links |
PubMed PMC2386489 Online version:10.1186/1471-2164-9-163 |
| Keywords |
Aspergillus nidulans/genetics; Aspergillus nidulans/metabolism; Genome, Fungal; Genomics; Metabolic Networks and Pathways; Models, Biological |
Significance
Annotations
| Gene product | Qualifier | GO Term | Evidence Code | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|
|
enables |
GO:0004354: glutamate dehydrogenase (NADP+) activity |
ECO:0000245: automatically integrated combinatorial evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009064: glutamine family amino acid metabolic process |
ECO:0000245: automatically integrated combinatorial evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016034: maleylacetoacetate isomerase activity |
ECO:0000245: automatically integrated combinatorial evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009073: aromatic amino acid family biosynthetic process |
ECO:0000245: automatically integrated combinatorial evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006031: chitin biosynthetic process |
ECO:0000245: automatically integrated combinatorial evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004100: chitin synthase activity |
ECO:0000245: automatically integrated combinatorial evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004100: chitin synthase activity |
ECO:0000245: automatically integrated combinatorial evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006031: chitin biosynthetic process |
ECO:0000245: automatically integrated combinatorial evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
Notes
See also
References
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