PHOAS:Q1ZNC4

Species (Taxon ID)	Photobacterium angustum (strain S14 / CCUG 15956) (Vibrio sp. (strainS14 / CCUG 15956)). (314292)
Gene Name(s)	No Information Provided.
Protein Name(s)	RNA polymerase sigma factor (ECO:0000256 with RuleBase:RU000716)
External Links
UniProt	Q1ZNC4
EMBL	AAOJ01000005
ProteinModelPortal	Q1ZNC4
SMR	Q1ZNC4
EnsemblBacteria	EAS63805
PATRIC	31352161
GO	GO:0003677 GO:0016779 GO:0003700 GO:0016987 GO:0006352
Gene3D	1.10.10.10
InterPro	IPR014284 IPR000838 IPR007627 IPR013249 IPR014286 IPR013325 IPR013324 IPR011991
Pfam	PF04542 PF08281
SUPFAM	SSF88659 SSF88946
TIGRFAMs	TIGR02939 TIGR02937
PROSITE	PS01063

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
involved_in	GO:2000142	regulation of DNA-templated transcription, initiation	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0016987	P		Seeded From UniProt	complete
involved_in	GO:2000142	regulation of DNA-templated transcription, initiation	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0016987	P		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000838 InterPro:IPR013249 InterPro:IPR014286	F		Seeded From UniProt	complete
enables	GO:0003700	DNA-binding transcription factor activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000838 InterPro:IPR007627 InterPro:IPR013249 InterPro:IPR013325 InterPro:IPR014284 InterPro:IPR014286	F		Seeded From UniProt	complete
involved_in	GO:0006352	DNA-templated transcription, initiation	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000838 InterPro:IPR007627 InterPro:IPR013249 InterPro:IPR013325 InterPro:IPR014284 InterPro:IPR014286	P		Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000838 InterPro:IPR007627 InterPro:IPR013249 InterPro:IPR013325 InterPro:IPR014284 InterPro:IPR014286	P		Seeded From UniProt	complete
enables	GO:0016987	sigma factor activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000838 InterPro:IPR013249 InterPro:IPR014286	F		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000038	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-KW:KW-0238	F		Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	GO_REF:0000038	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-KW:KW-0731	P		Seeded From UniProt	complete
enables	GO:0016779	nucleotidyltransferase activity	GO_REF:0000038	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-KW:KW-0548	F		Seeded From UniProt	complete
enables	GO:0016987	sigma factor activity	GO_REF:0000038	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-KW:KW-0731	F		Seeded From UniProt	complete
enables	GO:0016740	transferase activity	GO_REF:0000038	ECO:0000323	imported automatically asserted information used in automatic assertion	UniProtKB-KW:KW-0808	F		Seeded From UniProt	complete
	GO:0006355	regulation of transcription, DNA-dependent	PMID:11092857	ECO:0000315			P		Figure 3 show the homology of a region of the V. angustum genome with rpoE in other beacteria species. There are large regions in which amino acid sequence is conserved. Figure 4 shows an increase in rpoE expression in response to heat shock. Figure 5 shows that rpoE mutants are more sensitive to heat shock and oxidative stress than the wild type. This suggests that, like in other species, rpoE is a transcriptional regulator involved in the stress response.	complete CACAO 2847
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