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PHATR:L8B080

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Species (Taxon ID) Phaeodactylum tricornutum. (2850)
Gene Name(s) ptSLC4-2 (ECO:0000313 with EMBL:BAM75352.1)
Protein Name(s) Solute carrier protein 4 family (ECO:0000313 with EMBL:BAM75352.1)
External Links
UniProt L8B080
EMBL AB733621
GO GO:0016021
GO:0005452
InterPro IPR011531
IPR003020
PANTHER PTHR11453
Pfam PF00955

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0005886

plasma membrane

PMID:23297242[1]

ECO:0000314

C

Figure 2 B, C and D show that upon fusing the ptSLC4-2 transporter to GFP, it is shown to be localized to the plasmalemma (the same thing as the plasma membrane). Figure 2C shows that ptSLC4-2 is not localized to the nucleus or the chloroplast, and Figure 2D shows that it is localized instead to the plasmalemma.

complete
CACAO 9785

part_of

GO:0005886

plasma membrane

PMID:23297242[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0015698

inorganic anion transport

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0005452

P

Seeded From UniProt

complete

enables

GO:0005452

inorganic anion exchanger activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003020

F

Seeded From UniProt

complete

involved_in

GO:0006820

anion transport

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003020
InterPro:IPR011531

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003020

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011531

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Nakajima, K et al. (2013) SLC4 family transporters in a marine diatom directly pump bicarbonate from seawater. Proc. Natl. Acad. Sci. U.S.A. 110 1767-72 PubMed GONUTS page