GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

PHATC:B7G7S4

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Phaeodactylum tricornutum (strain CCAP 1055/1). (556484)
Gene Name(s) ACC1 (ECO:0000313 with EMBL:EEC45285.1)
Protein Name(s) Acetyl-coa carboxylase (ECO:0000313 with EMBL:EEC45285.1)
External Links
UniProt B7G7S4
EMBL CM000620
RefSeq XP_002183067.1
UniGene Ptc.663
ProteinModelPortal B7G7S4
STRING 2850.JGI54926
EnsemblProtists Phatr54926
GeneID 7194806
KEGG pti:PHATRDRAFT_54926
HOGENOM HOG000214115
InParanoid B7G7S4
KO K11262
Proteomes UP000000759
GO GO:0003989
GO:0005524
GO:0004075
GO:0046872
GO:0006633
Gene3D 3.30.1490.20
3.30.470.20
3.40.50.20
3.90.226.10
InterPro IPR013537
IPR011761
IPR013815
IPR013816
IPR001882
IPR011764
IPR005482
IPR000089
IPR005481
IPR000022
IPR005479
IPR029045
IPR011763
IPR011762
IPR016185
IPR011054
IPR011053
Pfam PF08326
PF02785
PF00364
PF01039
PF00289
PF02786
SMART SM00878
SUPFAM SSF51230
SSF51246
SSF52096
SSF52440
PROSITE PS50975
PS50979
PS00188
PS50968
PS50989
PS50980
PS00867

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0003989

acetyl-CoA carboxylase activity

PMID:23621611[1]

ECO:0000315

F

Figure 4 shows that when E. coli is transformed with the P. tricornutum ACCase subunit catalyzing the first committed step of the fatty acid biosynthetic pathway, the neutral lipid content significantly increases. When E. coli was transformed with the empty vector there was no neutral lipid content change compared to untransformed E. coli. Table 1 quantifies the ACCase enzyme activity, showing that the mutant E. coli containing P. tricornutum ACCase has significantly higher ACCase activity compared to the empty vector or the untransformed E. coli.

complete
CACAO 9770

enables

GO:0003989

acetyl-CoA carboxylase activity

PMID:23621611[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003989

acetyl-CoA carboxylase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013537

F

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR005479
InterPro:IPR011761
InterPro:IPR013537
InterPro:IPR013815

F

Seeded From UniProt

complete

involved_in

GO:0006633

fatty acid biosynthetic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013537

P

Seeded From UniProt

complete

enables

GO:0016874

ligase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011763

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR011761

F

Seeded From UniProt

complete

enables

GO:0003989

acetyl-CoA carboxylase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:6.4.1.2

F

Seeded From UniProt

complete

enables

GO:0004075

biotin carboxylase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:6.3.4.14

F

Seeded From UniProt

complete

enables

GO:0016874

ligase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0436

F

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0067

F

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000414645

F

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000414645

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Xie, WH et al. () Functional characterization of an ACCase subunit from the diatom Phaeodactylum tricornutum expressed in Escherichia coli. Biotechnol. Appl. Biochem. 60 330-5 PubMed GONUTS page