PELBH:HPBD

Species (Taxon ID)	Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601). (314265)
Gene Name(s)	hpbD
Protein Name(s)	4-hydroxyproline betaine 2-epimerase Hyp-B 2-epimerase (4R)-4-hydroxyproline betaine 2-epimerase
External Links
UniProt	Q0FPQ4
EMBL	AATQ01000017
RefSeq	WP_007801489.1
PDB	2PMQ 4H2H
PDBsum	2PMQ 4H2H
ProteinModelPortal	Q0FPQ4
SMR	Q0FPQ4
DIP	DIP-60607N
STRING	314265.R2601_01638
EnsemblBacteria	EAU46159
PATRIC	28150214
eggNOG	ENOG4107WEA ENOG41107K3
EvolutionaryTrace	Q0FPQ4
Proteomes	UP000006230
GO	GO:0000287 GO:0036361 GO:0016855 GO:0006579
Gene3D	3.20.20.120 3.30.390.10
InterPro	IPR029065 IPR029017 IPR013342 IPR013341 IPR001354
PANTHER	PTHR13794
Pfam	PF13378 PF02746
SMART	SM00922
SUPFAM	SSF51604 SSF54826

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives	PMID:24056934	ECO:0000314			F		Figure 4-b shows the kinetic parameters for the epimerase activity on two different substrates. Although the kcat/Km values are only modest, the authors note that the concentrations of these substrates within the cell are usually high, resulting in a large Km value being acceptable.	complete CACAO 10215
enables	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives	PMID:24056934	ECO:0000314	direct assay evidence used in manual assertion		F		Seeded From UniProt	complete
enables	GO:0036361	racemase activity, acting on amino acids and derivatives	PMID:24056934	ECO:0000314	direct assay evidence used in manual assertion		F		Seeded From UniProt	complete
involved_in	GO:0006579	amino-acid betaine catabolic process	PMID:24056934	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:A1BBM5	P		Seeded From UniProt	complete
enables	GO:0000287	magnesium ion binding	PMID:24056934	ECO:0000314	direct assay evidence used in manual assertion		F		Seeded From UniProt	complete
involved_in	GO:0006579	amino-acid betaine catabolic process	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR034622	P		Seeded From UniProt	complete
enables	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR034622	F		Seeded From UniProt	complete
enables	GO:0046872	metal ion binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0479	F		Seeded From UniProt	complete
enables	GO:0016853	isomerase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0413	F		Seeded From UniProt	complete
edit table

References

See Help:References for how to manage references in GONUTS.