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ORYSJ:Q6Z3Y3
Contents
| Species (Taxon ID) | Oryza sativa subsp. japonica (Rice). (39947) | |
| Gene Name(s) | P0627E10.13 (ECO:0000313 with EMBL:BAC84062.1) | |
| Protein Name(s) | Os07g0694600 protein (ECO:0000313 with EMBL:BAF22654.1)
Putative prephenate dehydratase (ECO:0000313 with EMBL:BAC84062.1) cDNA clone:J013059A18, full insert sequence (ECO:0000313 with EMBL:BAG89965.1) | |
| External Links | ||
| UniProt | Q6Z3Y3 | |
| EMBL | AP005199 AP008213 AK066428 | |
| RefSeq | NP_001060740.1 | |
| UniGene | Os.52331 | |
| EnsemblPlants | OS07T0694600-01 | |
| GeneID | 4344396 | |
| KEGG | osa:4344396 | |
| KO | K05359 | |
| OMA | IGVMAIE | |
| Proteomes | UP000000763 | |
| ExpressionAtlas | Q6Z3Y3 | |
| GO | GO:0016597 GO:0004664 GO:0009094 | |
| InterPro | IPR002912 IPR001086 IPR018528 | |
| Pfam | PF01842 PF00800 | |
| PROSITE | PS51671 PS00857 PS00858 PS51171 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0009507 |
chloroplast |
ECO:0000314 |
C |
Figure 8 shows an in vitro assay of recombinant PDT being imported into chloroplasts and processed, and protected from thermolysin degradation. |
complete | |||||
| GO:0004664 |
prephenate dehydratase activity |
ECO:0000314 |
F |
Table 1 shows kinetic properties of the PDT activity of the synthesized wild type PDT |
complete | |||||
| GO:0047769 |
arogenate dehydratase activity |
ECO:0000314 |
F |
Table 1 shows the kinetic properties of the ADT activity of synthesized PDT. |
complete | |||||
| GO:0009094 |
L-phenylalanine biosynthetic process |
ECO:0000315 |
P |
Figure 6 and 7 show increase Phe content in a PDT mutant (M47) that has a mutation in the regulatory site. Table 1 shows that this mutant is less sensitive to feedback inhibition by Phe. |
complete | |||||
|
involved_in |
GO:0009094 |
L-phenylalanine biosynthetic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0047769 |
arogenate dehydratase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004664 |
prephenate dehydratase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009507 |
chloroplast |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0047769 |
arogenate dehydratase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000470975 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0009507 |
chloroplast |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000470975 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009094 |
L-phenylalanine biosynthetic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10707 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004664 |
prephenate dehydratase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG10707 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004664 |
prephenate dehydratase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009094 |
L-phenylalanine biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0047769 |
arogenate dehydratase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008652 |
cellular amino acid biosynthetic process |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009094 |
L-phenylalanine biosynthetic process |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016829 |
lyase activity |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009507 |
chloroplast |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009073 |
aromatic amino acid family biosynthetic process |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009536 |
plastid |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009570 |
chloroplast stroma |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009507 |
chloroplast |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000236433 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0009570 |
chloroplast stroma |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000236433 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0047769 |
arogenate dehydratase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000236433 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009094 |
L-phenylalanine biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00121 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 Yamada, T et al. (2008) Mutation of a rice gene encoding a phenylalanine biosynthetic enzyme results in accumulation of phenylalanine and tryptophan. Plant Cell 20 1316-29 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
