GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

ORYSJ:Q10SE7

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Oryza sativa subsp. japonica (Rice). (39947)
Gene Name(s) No Information Provided.
Protein Name(s) Beta-carotene hydroxylase, putative, expressed (ECO:0000313 with EMBL:ABF93742.1)
External Links
UniProt Q10SE7
EMBL DP000009
Gramene Q10SE7
eggNOG NOG15912
HOGENOM HOG000032289
OMA EGAFELN
GO GO:0016021
GO:0005506
GO:0016491
GO:0006633
InterPro IPR006694
Pfam PF04116

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0009507

chloroplast

PMID:20852032[1]

ECO:0000314

C

Figure 4 A and C show by fluorescent microscopy and western blotting that DSM2 localizes to the chloroplasts.

complete
CACAO 5542

GO:0016123

xanthophyll biosynthetic process

PMID:20852032[1]

ECO:0000315

P

Table 1 shows that dsm2 mutants have reduced xanthophyll and DSM2 overexpressors have increased xathophyll.

complete
CACAO 5543

GO:0016119

carotene metabolic process

PMID:20852032[1]

ECO:0000315

P

Table 1 shows that dsm2 mutants have altered carotene content, and DSM2 overexpressors have reduced beta-carotene content, suggesting that DSM2 is involved in a carotene metabolic process.

complete
CACAO 5544

involved_in

GO:0016119

carotene metabolic process

PMID:20852032[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0016123

xanthophyll biosynthetic process

PMID:20852032[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0009507

chloroplast

PMID:20852032[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0005506

iron ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006694

F

Seeded From UniProt

complete

involved_in

GO:0008610

lipid biosynthetic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006694

P

Seeded From UniProt

complete

enables

GO:0016491

oxidoreductase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006694

F

Seeded From UniProt

complete

involved_in

GO:0055114

oxidation-reduction process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006694

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 1.5 Du, H et al. (2010) Characterization of the beta-carotene hydroxylase gene DSM2 conferring drought and oxidative stress resistance by increasing xanthophylls and abscisic acid synthesis in rice. Plant Physiol. 154 1304-18 PubMed GONUTS page