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ORYSJ:GL84

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Species (Taxon ID) Oryza sativa subsp. japonica (Rice). (39947)
Gene Name(s) GER1
Protein Name(s) Germin-like protein 8-4

Germin-like protein 1 OsGER1

External Links
UniProt Q6YZZ6
EMBL AF032971
AP005505
AP005531
AP008214
CM000145
AK059338
PIR T02239
RefSeq NP_001061158.1
UniGene Os.2209
ProteinModelPortal Q6YZZ6
PaxDb Q6YZZ6
EnsemblPlants OS08T0189300-01
GeneID 4344840
KEGG osa:4344840
Gramene Q6YZZ6
eggNOG NOG303458
HOGENOM HOG000235000
InParanoid Q6YZZ6
OMA DMPRSTM
Proteomes UP000000763
GO GO:0048046
GO:0030145
GO:0045735
Gene3D 2.60.120.10
InterPro IPR006045
IPR001929
IPR019780
IPR014710
IPR011051
Pfam PF00190
PRINTS PR00325
SMART SM00835
SUPFAM SSF51182
PROSITE PS00725

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0005618

cell wall

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001261635
TAIR:locus:2012260
TAIR:locus:2152257
TAIR:locus:2152267
TAIR:locus:2180444
UniProtKB:Q9M263

C

Seeded From UniProt

complete

enables

GO:0030145

manganese ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001929
InterPro:IPR019780

F

Seeded From UniProt

complete

enables

GO:0045735

nutrient reservoir activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006045

F

Seeded From UniProt

complete

part_of

GO:0005576

extracellular region

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0964

C

Seeded From UniProt

complete

part_of

GO:0048046

apoplast

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0052
UniProtKB-SubCell:SL-0019

C

Seeded From UniProt

complete

GO:0010017

red or far-red light signaling pathway

PMID:17048141[2]

ECO:0000315

P

Figure 4 shows transcript levels of PhyA and PhyB mutants in the dark and with a red light pulse. Those with one phytochrome mutated had an increase in transcript level after the red light pulse and mutants wit both phytocromes mutated had no GER1 response. Figure 2 shows an accumulation of GER1 in red and far red light for wild type and little induction of GER1 in hebiba mutant with impaired light response.

complete
CACAO 9776

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  2. Riemann, M et al. (2007) GER1, a GDSL motif-encoding gene from rice is a novel early light- and jasmonate-induced gene. Plant Biol (Stuttg) 9 32-40 PubMed GONUTS page