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ORYSJ:GL84
Contents
Species (Taxon ID) | Oryza sativa subsp. japonica (Rice). (39947) | |
Gene Name(s) | GER1 | |
Protein Name(s) | Germin-like protein 8-4
Germin-like protein 1 OsGER1 | |
External Links | ||
UniProt | Q6YZZ6 | |
EMBL | AF032971 AP005505 AP005531 AP008214 CM000145 AK059338 | |
PIR | T02239 | |
RefSeq | NP_001061158.1 | |
UniGene | Os.2209 | |
ProteinModelPortal | Q6YZZ6 | |
PaxDb | Q6YZZ6 | |
EnsemblPlants | OS08T0189300-01 | |
GeneID | 4344840 | |
KEGG | osa:4344840 | |
Gramene | Q6YZZ6 | |
eggNOG | NOG303458 | |
HOGENOM | HOG000235000 | |
InParanoid | Q6YZZ6 | |
OMA | DMPRSTM | |
Proteomes | UP000000763 | |
GO | GO:0048046 GO:0030145 GO:0045735 | |
Gene3D | 2.60.120.10 | |
InterPro | IPR006045 IPR001929 IPR019780 IPR014710 IPR011051 | |
Pfam | PF00190 | |
PRINTS | PR00325 | |
SMART | SM00835 | |
SUPFAM | SSF51182 | |
PROSITE | PS00725 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:0005618 |
cell wall |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001261635 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0030145 |
manganese ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0045735 |
nutrient reservoir activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005576 |
extracellular region |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0048046 |
apoplast |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
GO:0010017 |
red or far-red light signaling pathway |
ECO:0000315 |
P |
Figure 4 shows transcript levels of PhyA and PhyB mutants in the dark and with a red light pulse. Those with one phytochrome mutated had an increase in transcript level after the red light pulse and mutants wit both phytocromes mutated had no GER1 response. Figure 2 shows an accumulation of GER1 in red and far red light for wild type and little induction of GER1 in hebiba mutant with impaired light response. |
complete | |||||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Riemann, M et al. (2007) GER1, a GDSL motif-encoding gene from rice is a novel early light- and jasmonate-induced gene. Plant Biol (Stuttg) 9 32-40 PubMed GONUTS page