MOUSE:VPS52

Species (Taxon ID)	Mus musculus (Mouse). (10090)
Gene Name(s)	Vps52
Protein Name(s)	Vacuolar protein sorting-associated protein 52 homolog
External Links
UniProt	Q8C754
EMBL	AK051732 AK052523 AF100956 AF110520 BC063329
CCDS	CCDS37574.1
RefSeq	NP_766208.2
UniGene	Mm.448614 Mm.485758
ProteinModelPortal	Q8C754
PhosphoSite	Q8C754
MaxQB	Q8C754
PaxDb	Q8C754
PRIDE	Q8C754
Ensembl	ENSMUST00000025178
GeneID	224705
KEGG	mmu:224705
UCSC	uc008cam.1
CTD	6293
MGI	MGI:1330304
eggNOG	NOG296730
GeneTree	ENSGT00390000008815
HOGENOM	HOG000020960
HOVERGEN	HBG052966
InParanoid	Q8C754
OMA	THYLEVP
OrthoDB	EOG7HTHGH
PhylomeDB	Q8C754
TreeFam	TF314937
ChiTaRS	Vps52
NextBio	377320
PRO	PR:Q8C754
Proteomes	UP000000589
Bgee	Q8C754
CleanEx	MM_VPS52
ExpressionAtlas	Q8C754
Genevestigator	Q8C754
GO	GO:0010008 GO:0005794 GO:0010668 GO:0048611 GO:0015031
InterPro	IPR007258
PANTHER	PTHR14190
Pfam	PF04129

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
part_of	GO:1990745	EARP complex	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q8N1B4	C	Seeded From UniProt	complete
part_of	GO:0055037	recycling endosome	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q8N1B4	C	Seeded From UniProt	complete
involved_in	GO:0032456	endocytic recycling	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q8N1B4	P	Seeded From UniProt	complete
involved_in	GO:0042147	retrograde transport, endosome to Golgi	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000367098 SGD:S000002892	P	Seeded From UniProt	complete
involved_in	GO:0032456	endocytic recycling	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0031710 PANTHER:PTN000367098 UniProtKB:Q8N1B4	P	Seeded From UniProt	complete
enables	GO:0019905	syntaxin binding	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000367098 UniProtKB:Q8N1B4 WB:WBGene00007059	F	Seeded From UniProt	complete
enables	GO:0017137	Rab GTPase binding	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0031710 PANTHER:PTN000367098 WB:WBGene00007059	F	Seeded From UniProt	complete
involved_in	GO:0007041	lysosomal transport	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN001021633 UniProtKB:Q8N1B4	P	Seeded From UniProt	complete
involved_in	GO:0006896	Golgi to vacuole transport	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000367098 SGD:S000002892	P	Seeded From UniProt	complete
part_of	GO:0000938	GARP complex	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0031710 PANTHER:PTN000367098 TAIR:locus:2032343 UniProtKB:Q8N1B4 WB:WBGene00007059	C	Seeded From UniProt	complete
part_of	GO:1990745	EARP complex	PMID:25799061^[2]	ECO:0000266	sequence orthology evidence used in manual assertion	UniProtKB:Q8N1B4	C	Seeded From UniProt	complete
part_of	GO:1990745	EARP complex	GO_REF:0000096	ECO:0000266	sequence orthology evidence used in manual assertion	UniProtKB:Q8N1B4	C	Seeded From UniProt	complete
part_of	GO:0055037	recycling endosome	GO_REF:0000096	ECO:0000266	sequence orthology evidence used in manual assertion	UniProtKB:Q8N1B4	C	Seeded From UniProt	complete
acts_upstream_of_or_within	GO:0048611	embryonic ectodermal digestive tract development	PMID:23142660^[3]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
part_of	GO:0048471	perinuclear region of cytoplasm	GO_REF:0000096	ECO:0000266	sequence orthology evidence used in manual assertion	UniProtKB:Q8N1B4	C	Seeded From UniProt	complete
acts_upstream_of_or_within	GO:0032456	endocytic recycling	GO_REF:0000096	ECO:0000266	sequence orthology evidence used in manual assertion	UniProtKB:Q8N1B4	P	Seeded From UniProt	complete
enables	GO:0019905	syntaxin binding	GO_REF:0000096	ECO:0000266	sequence orthology evidence used in manual assertion	UniProtKB:Q8N1B4	F	Seeded From UniProt	complete
part_of	GO:0016020	membrane	PMID:25799061^[2]	ECO:0000266	sequence orthology evidence used in manual assertion	UniProtKB:Q8N1B4	C	Seeded From UniProt	complete
acts_upstream_of_or_within	GO:0010668	ectodermal cell differentiation	PMID:23142660^[3]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
acts_upstream_of_or_within	GO:0007041	lysosomal transport	PMID:25799061^[2]	ECO:0000266	sequence orthology evidence used in manual assertion	UniProtKB:Q8N1B4	P	Seeded From UniProt	complete
part_of	GO:0005794	Golgi apparatus	GO_REF:0000096	ECO:0000266	sequence orthology evidence used in manual assertion	UniProtKB:Q8N1B4	C	Seeded From UniProt	complete
part_of	GO:0000938	GARP complex	PMID:25799061^[2]	ECO:0000266	sequence orthology evidence used in manual assertion	UniProtKB:Q8N1B4	C	Seeded From UniProt	complete
part_of	GO:0005829	cytosol	GO_REF:0000108	ECO:0000364	evidence based on logical inference from manual annotation used in automatic assertion	GO:0042147	C	Seeded From UniProt	complete
part_of	GO:1990745	EARP complex	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q8N1B4 ensembl:ENSP00000409952	C	Seeded From UniProt	complete
part_of	GO:0055037	recycling endosome	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q8N1B4 ensembl:ENSP00000409952	C	Seeded From UniProt	complete
part_of	GO:0048471	perinuclear region of cytoplasm	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q8N1B4 ensembl:ENSP00000409952	C	Seeded From UniProt	complete
involved_in	GO:0032456	endocytic recycling	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q8N1B4 ensembl:ENSP00000409952	P	Seeded From UniProt	complete
enables	GO:0019905	syntaxin binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q8N1B4 ensembl:ENSP00000409952	F	Seeded From UniProt	complete
part_of	GO:0016020	membrane	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q8N1B4 ensembl:ENSP00000409952	C	Seeded From UniProt	complete
involved_in	GO:0007041	lysosomal transport	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q8N1B4 ensembl:ENSP00000409952	P	Seeded From UniProt	complete
part_of	GO:0005794	Golgi apparatus	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q8N1B4 ensembl:ENSP00000409952	C	Seeded From UniProt	complete
part_of	GO:0000938	GARP complex	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q8N1B4 ensembl:ENSP00000409952	C	Seeded From UniProt	complete
part_of	GO:0005794	Golgi apparatus	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0333 UniProtKB-SubCell:SL-0132	C	Seeded From UniProt	complete
part_of	GO:0016020	membrane	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0472	C	Seeded From UniProt	complete
involved_in	GO:0015031	protein transport	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0653	P	Seeded From UniProt	complete
part_of	GO:0005768	endosome	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0967	C	Seeded From UniProt	complete
part_of	GO:0055037	recycling endosome	GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-SubCell:SL-0232	C	Seeded From UniProt	complete
part_of	GO:0010008	endosome membrane	GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-SubCell:SL-0100	C	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 ^1.2 ^1.3 ^1.4 ^1.5 ^1.6 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
↑ ^2.0 ^2.1 ^2.2 ^2.3 Schindler, C et al. (2015) EARP is a multisubunit tethering complex involved in endocytic recycling. Nat. Cell Biol. 17 639-50 PubMed GONUTS page
↑ ^3.0 ^3.1 Sugimoto, M et al. (2012) Molecular identification of t(w5): Vps52 promotes pluripotential cell differentiation through cell-cell interactions. Cell Rep 2 1363-74 PubMed GONUTS page

[PMID:21873635-1] 1.0 ^1.1 ^1.2 ^1.3 ^1.4 ^1.5 ^1.6 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:25799061-2] 2.0 ^2.1 ^2.2 ^2.3 Schindler, C et al. (2015) EARP is a multisubunit tethering complex involved in endocytic recycling. Nat. Cell Biol. 17 639-50 PubMed GONUTS page

[PMID:23142660-3] 3.0 ^3.1 Sugimoto, M et al. (2012) Molecular identification of t(w5): Vps52 promotes pluripotential cell differentiation through cell-cell interactions. Cell Rep 2 1363-74 PubMed GONUTS page

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MOUSE:VPS52

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