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MOUSE:TDRD6
Contents
| Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
| Gene Name(s) | Tdrd6 | |
| Protein Name(s) | Tudor domain-containing protein 6 | |
| External Links | ||
| UniProt | P61407 | |
| EMBL | AB097085 | |
| CCDS | CCDS28797.1 | |
| RefSeq | NP_940810.2 | |
| UniGene | Mm.329058 | |
| ProteinModelPortal | P61407 | |
| SMR | P61407 | |
| STRING | 10090.ENSMUSP00000131277 | |
| iPTMnet | P61407 | |
| PhosphoSitePlus | P61407 | |
| PaxDb | P61407 | |
| PRIDE | P61407 | |
| GeneID | 210510 | |
| KEGG | mmu:210510 | |
| CTD | 221400 | |
| MGI | MGI:2679727 | |
| eggNOG | KOG2039 ENOG4110W7C | |
| HOGENOM | HOG000154540 | |
| HOVERGEN | HBG059095 | |
| InParanoid | P61407 | |
| KO | K18405 | |
| PhylomeDB | P61407 | |
| Reactome | [www.reactome.org/content/detail/R-MMU-5601884 R-MMU-5601884] | |
| PRO | PR:P61407 | |
| Proteomes | UP000000589 | |
| CleanEx | MM_TDRD6 | |
| GO | GO:0033391 GO:0005737 GO:0005829 GO:0005783 GO:0030529 GO:0043186 GO:0007281 GO:0007275 GO:0034587 GO:0007283 | |
| InterPro | IPR002999 | |
| Pfam | PF00567 | |
| SMART | SM00333 | |
| PROSITE | PS50304 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0000387 |
spliceosomal snRNP assembly |
ECO:0000315 |
P |
Fig 3, human Tdrd6. |
complete | |||||
|
part_of |
GO:0033391 |
chromatoid body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007283 |
spermatogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:1990904 |
ribonucleoprotein complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(EMAPA:17972) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0043186 |
P granule |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000039) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0043186 |
P granule |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
acts_upstream_of_or_within |
GO:0007281 |
germ cell development |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
results_in_development_of:(CL:0000017) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005783 |
endoplasmic reticulum |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(EMAPA:17972) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005829 |
cytosol |
Reactome:R-MMU-5629239 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
|
involved_in |
GO:0007275 |
multicellular organism development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007283 |
spermatogenesis |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0030154 |
cell differentiation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Akpınar, M et al. (2017) TDRD6 mediates early steps of spliceosome maturation in primary spermatocytes. PLoS Genet. 13 e1006660 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Vasileva, A et al. (2009) Tdrd6 is required for spermiogenesis, chromatoid body architecture, and regulation of miRNA expression. Curr. Biol. 19 630-9 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Hosokawa, M et al. (2007) Tudor-related proteins TDRD1/MTR-1, TDRD6 and TDRD7/TRAP: domain composition, intracellular localization, and function in male germ cells in mice. Dev. Biol. 301 38-52 PubMed GONUTS page
- ↑ Pan, J et al. (2005) RNF17, a component of the mammalian germ cell nuage, is essential for spermiogenesis. Development 132 4029-39 PubMed GONUTS page
- ↑ Choi, E et al. (2007) Integrative characterization of germ cell-specific genes from mouse spermatocyte UniGene library. BMC Genomics 8 256 PubMed GONUTS page
