MOUSE:PTCD1

Species (Taxon ID)	Mus musculus (Mouse). (10090)
Gene Name(s)	Ptcd1
Protein Name(s)	Pentatricopeptide repeat-containing protein 1, mitochondrial
External Links
UniProt	Q8C2E4
EMBL	AK088764 AK171484 BC004766 BC083097
CCDS	CCDS19858.1
RefSeq	NP_598496.3
UniGene	Mm.277413 Mm.332840 Mm.474456
ProteinModelPortal	Q8C2E4
IntAct	Q8C2E4
MINT	Q8C2E4
STRING	10090.ENSMUSP00000031628
PhosphoSitePlus	Q8C2E4
MaxQB	Q8C2E4
PaxDb	Q8C2E4
PRIDE	Q8C2E4
DNASU	71799
Ensembl	ENSMUST00000031628
GeneID	71799
KEGG	mmu:71799
UCSC	uc009amh.2
CTD	26024
MGI	MGI:1919049
eggNOG	KOG4197 ENOG410Z7Z7
GeneTree	ENSGT00390000015597
HOGENOM	HOG000237315
HOVERGEN	HBG053748
InParanoid	Q8C2E4
KO	K17710
OMA	FRAYYKQ
OrthoDB	EOG091G02E4
TreeFam	TF324792
PRO	PR:Q8C2E4
Proteomes	UP000000589
Bgee	ENSMUSG00000029624
CleanEx	MM_PTCD1
ExpressionAtlas	Q8C2E4
Genevisible	Q8C2E4
GO	GO:0005759 GO:0000049 GO:0042780
Gene3D	1.25.40.10
InterPro	IPR002885 IPR011990
Pfam	PF13041 PF13812
TIGRFAMs	TIGR00756
PROSITE	PS51375

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
	GO:0032543	mitochondrial translation	PMID:29617655	ECO:0000315			P		In this paper, they measured de novo mitochondrial protein synthesis of the 13 mtDNA-encoded respiratory complex subunits and showed a dramatic loss of translation in the Ptcd1 knockout mice compared to controls in both tissues (Figures 3A and S1A), indicating that PTCD1 is essential for mitochondrial protein synthesis.	complete CACAO 13293
involved_in	GO:0042780	tRNA 3'-end processing	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:O75127	P		Seeded From UniProt	complete
part_of	GO:0005759	mitochondrial matrix	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:A2VD13	C		Seeded From UniProt	complete
enables	GO:0000049	tRNA binding	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:O75127	F		Seeded From UniProt	complete
involved_in	GO:0042780	tRNA 3'-end processing		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN001165391 UniProtKB:O75127	P		Seeded From UniProt	complete
part_of	GO:0005759	mitochondrial matrix		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN001165391 RGD:1311473	C		Seeded From UniProt	complete
enables	GO:0000049	tRNA binding		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN001165391 UniProtKB:O75127	F		Seeded From UniProt	complete
part_of	GO:0005759	mitochondrial matrix	GO_REF:0000096	ECO:0000266	sequence orthology evidence used in manual assertion	RGD:1311473	C		Seeded From UniProt	complete
part_of	GO:0005759	mitochondrial matrix	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:A2VD13 ensembl:ENSRNOP00000068093	C		Seeded From UniProt	complete
part_of	GO:0005739	mitochondrion	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0496 UniProtKB-SubCell:SL-0173	C		Seeded From UniProt	complete
involved_in	GO:0008033	tRNA processing	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0819	P		Seeded From UniProt	complete
part_of	GO:0005759	mitochondrial matrix	GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-SubCell:SL-0170	C		Seeded From UniProt	complete
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References

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