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MOUSE:PDGFA

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Species (Taxon ID) Mus musculus (Mouse). (10090)
Gene Name(s) Pdgfa
Protein Name(s) Platelet-derived growth factor subunit A

PDGF subunit A PDGF-1 Platelet-derived growth factor A chain Platelet-derived growth factor alpha polypeptide

External Links
UniProt P20033
EMBL S66873
S66868
S66869
S66870
S66871
S66872
S66874
S66868
S66869
S66870
S66871
S66872
M29464
CCDS CCDS19802.1
PIR A37359
RefSeq NP_032834.1
UniGene Mm.2675
ProteinModelPortal P20033
SMR P20033
PhosphoSite P20033
PaxDb P20033
PRIDE P20033
GeneID 18590
KEGG mmu:18590
CTD 5154
MGI MGI:97527
eggNOG NOG75094
HOGENOM HOG000286027
HOVERGEN HBG053546
InParanoid P20033
KO K04359
PhylomeDB P20033
NextBio 294472
PRO PR:P20033
Proteomes UP000000589
CleanEx MM_PDGFA
Genevestigator P20033
GO GO:0009986
GO:0005615
GO:0016020
GO:0005902
GO:0005518
GO:0008083
GO:0005161
GO:0042803
GO:0030036
GO:0001525
GO:0007596
GO:0030031
GO:0048565
GO:1990401
GO:0001942
GO:0048286
GO:0050919
GO:0010512
GO:0010544
GO:0009887
GO:0048008
GO:0051781
GO:0030335
GO:0008284
GO:0045740
GO:0070374
GO:0048146
GO:0043406
GO:0043410
GO:0002053
GO:0035793
GO:0014068
GO:0031954
GO:0051897
GO:0060683
GO:0050730
GO:0014910
GO:0009611
GO:0043588
Gene3D 2.10.90.10
InterPro IPR029034
IPR023581
IPR000072
IPR006782
Pfam PF00341
PF04692
SMART SM00141
SUPFAM SSF57501
PROSITE PS00249
PS50278

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0048286

lung alveolus development

PMID:23938297[1]

ECO:0000315

P

Figure 4 - Concentration of PDGF-A is critical for development and maintenance of alveolar structure.

complete
CACAO 8895

involved_in

GO:0048286

lung alveolus development

PMID:23938297[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:1990401

embryonic lung development

PMID:9374392[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0009986

cell surface

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

C

Seeded From UniProt

complete

part_of

GO:0005615

extracellular space

PMID:19734317[3]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

NOT|involved_in

GO:2000278

regulation of DNA biosynthetic process

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

NOT|involved_in

GO:0072124

regulation of glomerular mesangial cell proliferation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

involved_in

GO:0070374

positive regulation of ERK1 and ERK2 cascade

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

involved_in

GO:0051897

positive regulation of protein kinase B signaling

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

involved_in

GO:0050919

negative chemotaxis

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

involved_in

GO:0048565

digestive tract development

PMID:10903171[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0048286

lung alveolus development

PMID:9374392[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0048146

positive regulation of fibroblast proliferation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

involved_in

GO:0048008

platelet-derived growth factor receptor signaling pathway

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

involved_in

GO:0008284

positive regulation of cell population proliferation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

involved_in

GO:0043410

positive regulation of MAPK cascade

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

involved_in

GO:0043406

positive regulation of MAP kinase activity

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

enables

GO:0042803

protein homodimerization activity

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

F

Seeded From UniProt

complete

involved_in

GO:0035793

positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

involved_in

GO:0031954

positive regulation of protein autophosphorylation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

involved_in

GO:0030335

positive regulation of cell migration

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

involved_in

GO:0014910

regulation of smooth muscle cell migration

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

involved_in

GO:0014068

positive regulation of phosphatidylinositol 3-kinase signaling

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

involved_in

GO:0010544

negative regulation of platelet activation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

involved_in

GO:0010512

negative regulation of phosphatidylinositol biosynthetic process

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

part_of

GO:0009986

cell surface

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

C

Seeded From UniProt

complete

involved_in

GO:0009611

response to wounding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

enables

GO:0008083

growth factor activity

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

F

Seeded From UniProt

complete

enables

GO:0005518

collagen binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

F

Seeded From UniProt

complete

enables

GO:0005161

platelet-derived growth factor receptor binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P04085

F

Seeded From UniProt

complete

involved_in

GO:0070374

positive regulation of ERK1 and ERK2 cascade

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000180420
UniProtKB:P01127
UniProtKB:P04085

P

Seeded From UniProt

complete

involved_in

GO:0048008

platelet-derived growth factor receptor signaling pathway

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1859631
PANTHER:PTN000180420
RGD:3283
UniProtKB:P01127
UniProtKB:P04085
UniProtKB:Q9NRA1

P

Seeded From UniProt

complete

involved_in

GO:0043406

positive regulation of MAP kinase activity

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000180420
RGD:3283
UniProtKB:P01127
UniProtKB:P04085

P

Seeded From UniProt

complete

involved_in

GO:0031954

positive regulation of protein autophosphorylation

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000908679
UniProtKB:P01127
UniProtKB:P04085

P

Seeded From UniProt

complete

involved_in

GO:0030335

positive regulation of cell migration

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:97528
PANTHER:PTN000180420
UniProtKB:B1H0W5
UniProtKB:P01127
UniProtKB:P04085

P

Seeded From UniProt

complete

involved_in

GO:0014068

positive regulation of phosphatidylinositol 3-kinase signaling

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:97528
PANTHER:PTN000180420
UniProtKB:P01127
UniProtKB:P04085

P

Seeded From UniProt

complete

involved_in

GO:0008284

positive regulation of cell population proliferation

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1859631
MGI:MGI:97527
PANTHER:PTN000908679
RGD:3282
UniProtKB:P01127
UniProtKB:P04085
UniProtKB:Q9NRA1

P

Seeded From UniProt

complete

part_of

GO:0005615

extracellular space

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:97527
PANTHER:PTN000908679
RGD:3283
RGD:621880
UniProtKB:P04085
UniProtKB:Q9NRA1

C

Seeded From UniProt

complete

enables

GO:0005161

platelet-derived growth factor receptor binding

PMID:21873635[5]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1859631
PANTHER:PTN000180420
UniProtKB:P01127
UniProtKB:P04085
UniProtKB:Q9NRA1

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0070374

positive regulation of ERK1 and ERK2 cascade

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0060683

regulation of branching involved in salivary gland morphogenesis by epithelial-mesenchymal signaling

PMID:18559345[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

  • regulates_o_has_participant:(EMAPA:17755)
  • regulates_o_has_participant:(CL:0000066)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0060348

bone development

PMID:23938297[1]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1859631

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051897

positive regulation of protein kinase B signaling

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0050919

negative chemotaxis

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0050730

regulation of peptidyl-tyrosine phosphorylation

PMID:11940581[7]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0048565

digestive tract development

PMID:23938297[1]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1859631

P

Seeded From UniProt

complete

enables

GO:0048407

platelet-derived growth factor binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0048286

lung alveolus development

PMID:23938297[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:5548172

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0048286

lung alveolus development

PMID:11803579[8]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1926817

P

results_in_development_of:(EMAPA:35433)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0048146

positive regulation of fibroblast proliferation

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0048008

platelet-derived growth factor receptor signaling pathway

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

enables

GO:0046982

protein heterodimerization activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0043588

skin development

PMID:10331973[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1926817

P

results_in_development_of:(EMAPA:17527)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0043410

positive regulation of MAPK cascade

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0043406

positive regulation of MAP kinase activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

enables

GO:0042803

protein homodimerization activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

F

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0035793

positive regulation of metanephric mesenchymal cell migration by platelet-derived growth factor receptor-beta signaling pathway

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0031954

positive regulation of protein autophosphorylation

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0030335

positive regulation of cell migration

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0030036

actin cytoskeleton organization

PMID:12176888[10]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0030031

cell projection assembly

PMID:12176888[10]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0014910

regulation of smooth muscle cell migration

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0014068

positive regulation of phosphatidylinositol 3-kinase signaling

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0010544

negative regulation of platelet activation

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0010512

negative regulation of phosphatidylinositol biosynthetic process

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

part_of

GO:0009986

cell surface

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0009887

animal organ morphogenesis

PMID:15361870[11]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1859631

P

has_participant:(EMAPA:18948)|has_participant:(EMAPA:36437)|has_participant:(EMAPA:17333)|has_participant:(EMAPA:17011)|has_participant:(EMAPA:16681)|has_participant:(EMAPA:17678)|has_participant:(EMAPA:18343)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0009887

animal organ morphogenesis

PMID:14522834[12]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1926817

P

has_participant:(EMAPA:19290)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0009611

response to wounding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0008284

positive regulation of cell population proliferation

PMID:10331973[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1926817

P

regulates_o_occurs_in:(EMAPA:17527)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0008284

positive regulation of cell population proliferation

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3282

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0008284

positive regulation of cell population proliferation

GO_REF:0000008

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

P

Seeded From UniProt

complete

enables

GO:0008083

growth factor activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

F

Seeded From UniProt

complete

part_of

GO:0005902

microvillus

PMID:12101409[13]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005615

extracellular space

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

C

Seeded From UniProt

complete

enables

GO:0005518

collagen binding

GO_REF:0000008

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

F

Seeded From UniProt

complete

enables

GO:0005161

platelet-derived growth factor receptor binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P04085

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0002053

positive regulation of mesenchymal cell proliferation

PMID:10331973[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1926817

P

occurs_in:(EMAPA:17525)|occurs_in:(EMAPA:18771)|occurs_in:(EMAPA:17527)|occurs_in:(EMAPA:35282)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0001942

hair follicle development

PMID:10331973[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1926817

P

results_in_development_of:(EMAPA:18771)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0001525

angiogenesis

PMID:12101409[13]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010469

regulation of signaling receptor activity

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0008083

P

Seeded From UniProt

complete

involved_in

GO:0010469

regulation of signaling receptor activity

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0008083

P

Seeded From UniProt

complete

involved_in

GO:0010469

regulation of signaling receptor activity

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0008083

P

Seeded From UniProt

complete

involved_in

GO:0010469

regulation of signaling receptor activity

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0008083

P

Seeded From UniProt

complete

enables

GO:0008083

growth factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000072
InterPro:IPR006782

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000072
InterPro:IPR006782

C

Seeded From UniProt

complete

enables

GO:0008083

growth factor activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0339

F

Seeded From UniProt

complete

involved_in

GO:0051781

positive regulation of cell division

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0497

P

Seeded From UniProt

complete

involved_in

GO:0007275

multicellular organism development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0217

P

Seeded From UniProt

complete

part_of

GO:0005576

extracellular region

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0964
UniProtKB-SubCell:SL-0243

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 Andrae, J et al. (2013) Analysis of mice lacking the heparin-binding splice isoform of platelet-derived growth factor A. Mol. Cell. Biol. 33 4030-40 PubMed GONUTS page
  2. 2.0 2.1 Lindahl, P et al. (1997) Alveogenesis failure in PDGF-A-deficient mice is coupled to lack of distal spreading of alveolar smooth muscle cell progenitors during lung development. Development 124 3943-53 PubMed GONUTS page
  3. Salazar, KD et al. (2009) Mesenchymal stem cells produce Wnt isoforms and TGF-beta1 that mediate proliferation and procollagen expression by lung fibroblasts. Am. J. Physiol. Lung Cell Mol. Physiol. 297 L1002-11 PubMed GONUTS page
  4. Karlsson, L et al. (2000) Abnormal gastrointestinal development in PDGF-A and PDGFR-(alpha) deficient mice implicates a novel mesenchymal structure with putative instructive properties in villus morphogenesis. Development 127 3457-66 PubMed GONUTS page
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