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MOUSE:NPC1
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Npc1 | |
Protein Name(s) | Niemann-Pick C1 protein | |
External Links | ||
UniProt | O35604 | |
EMBL | AF003348 AF003349 AC102096 AC102248 CH466622 | |
CCDS | CCDS29064.1 | |
PIR | T30188 | |
RefSeq | NP_032746.2 | |
UniGene | Mm.3484 | |
ProteinModelPortal | O35604 | |
ChEMBL | CHEMBL2321610 | |
PhosphoSite | O35604 | |
MaxQB | O35604 | |
PaxDb | O35604 | |
PRIDE | O35604 | |
Ensembl | ENSMUST00000025279 | |
GeneID | 18145 | |
KEGG | mmu:18145 | |
UCSC | uc008ecb.1 | |
CTD | 4864 | |
MGI | MGI:1097712 | |
eggNOG | NOG149152 | |
GeneTree | ENSGT00760000119174 | |
HOGENOM | HOG000036674 | |
HOVERGEN | HBG003913 | |
InParanoid | O35604 | |
KO | K12385 | |
OMA | AITETIC | |
OrthoDB | EOG7QRQT0 | |
TreeFam | TF300416 | |
ChiTaRS | Npc1 | |
NextBio | 293400 | |
PRO | PR:O35604 | |
Proteomes | UP000000589 | |
CleanEx | MM_NPC1 | |
ExpressionAtlas | O35604 | |
Genevestigator | O35604 | |
GO | GO:0005783 GO:0005768 GO:0005576 GO:0070062 GO:0005794 GO:0005887 GO:0031902 GO:0005765 GO:0005764 GO:0016020 GO:0045121 GO:0005635 GO:0048471 GO:0005886 GO:0031982 GO:0015485 GO:0008158 GO:0007628 GO:0006914 GO:0008206 GO:0071404 GO:0071383 GO:0033344 GO:0042632 GO:0008203 GO:0030301 GO:0006897 GO:0090150 GO:0007041 GO:0031579 GO:0060548 GO:0016242 GO:0006486 GO:0046686 GO:0042493 | |
InterPro | IPR004765 IPR003392 IPR000731 | |
Pfam | PF02460 | |
TIGRFAMs | TIGR00917 | |
PROSITE | PS50156 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0046718 |
entry of virus into host cell |
ECO:0000315 |
P |
Fig. 4 |
complete | |||||
GO:0046718 |
entry of virus into host cell |
ECO:0000315 |
P |
Fig. 2C and Fig. 2D |
complete | |||||
part_of |
GO:1905103 |
integral component of lysosomal membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042632 |
cholesterol homeostasis |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032367 |
intracellular cholesterol transport |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042632 |
cholesterol homeostasis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005764 |
lysosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0046718 |
viral entry into host cell |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0046718 |
viral entry into host cell |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042632 |
cholesterol homeostasis |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030301 |
cholesterol transport |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0015485 |
cholesterol binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008206 |
bile acid metabolic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007041 |
lysosomal transport |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006486 |
protein glycosylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005887 |
integral component of plasma membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005783 |
endoplasmic reticulum |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005764 |
lysosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005635 |
nuclear envelope |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005576 |
extracellular region |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005794 |
Golgi apparatus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(EMAPA:16846) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005783 |
endoplasmic reticulum |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005768 |
endosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005768 |
endosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(EMAPA:16846)|part_of:(CL:0000057) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005764 |
lysosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(EMAPA:16846)|part_of:(CL:0000057) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005635 |
nuclear envelope |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0005635 |
nuclear envelope |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:1905103 |
integral component of lysosomal membrane |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0090150 |
establishment of protein localization to membrane |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0071404 |
cellular response to low-density lipoprotein particle stimulus |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0071383 |
cellular response to steroid hormone stimulus |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0060548 |
negative regulation of cell death |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628693 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0046718 |
viral entry into host cell |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0046686 |
response to cadmium ion |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628693 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0045121 |
membrane raft |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0042632 |
cholesterol homeostasis |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0042493 |
response to drug |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0033344 |
cholesterol efflux |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1857409 |
P |
|
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0033344 |
cholesterol efflux |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0032367 |
intracellular cholesterol transport |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0031982 |
vesicle |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000057) |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0031579 |
membrane raft organization |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0030301 |
cholesterol transport |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0016242 |
negative regulation of macroautophagy |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:1891828 |
P |
regulates_o_occurs_in:(CL:0000057) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0016242 |
negative regulation of macroautophagy |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1857409 |
P |
regulates_o_occurs_in:(CL:0000057)|regulates_o_occurs_in:(EMAPA:16846)|regulates_o_occurs_in:(EMAPA:17787) |
Seeded From UniProt |
complete | |
part_of |
GO:0016020 |
membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(EMAPA:16846) |
Seeded From UniProt |
complete | ||
enables |
GO:0015485 |
cholesterol binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0007628 |
adult walking behavior |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:97180 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0006914 |
autophagy |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006897 |
endocytosis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:1857409 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0006486 |
protein glycosylation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005887 |
integral component of plasma membrane |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(EMAPA:16846) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060548 |
negative regulation of cell death |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:G3V7K5 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0046686 |
response to cadmium ion |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:G3V7K5 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:1905103 |
integral component of lysosomal membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15118 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090150 |
establishment of protein localization to membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15118 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15118 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0046718 |
viral entry into host cell |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15118 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042632 |
cholesterol homeostasis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15118 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0033344 |
cholesterol efflux |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15118 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032367 |
intracellular cholesterol transport |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15118 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0031579 |
membrane raft organization |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15118 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030301 |
cholesterol transport |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15118 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0015485 |
cholesterol binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15118 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006914 |
autophagy |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15118 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006486 |
protein glycosylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15118 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005887 |
integral component of plasma membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15118 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005783 |
endoplasmic reticulum |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15118 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005635 |
nuclear envelope |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O15118 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0005319 |
lipid transporter activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006629 |
lipid metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008202 |
steroid metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005768 |
endosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005764 |
lysosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008203 |
cholesterol metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0031902 |
late endosome membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005765 |
lysosomal membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Carette, JE et al. (2011) Ebola virus entry requires the cholesterol transporter Niemann-Pick C1. Nature 477 340-3 PubMed GONUTS page
- ↑ 2.0 2.1 Côté, M et al. (2011) Small molecule inhibitors reveal Niemann-Pick C1 is essential for Ebola virus infection. Nature 477 344-8 PubMed GONUTS page
- ↑ 3.0 3.1 Xie, X et al. (2011) Amino acid substitution in NPC1 that abolishes cholesterol binding reproduces phenotype of complete NPC1 deficiency in mice. Proc. Natl. Acad. Sci. U.S.A. 108 15330-5 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 Deffieu, MS & Pfeffer, SR (2011) Niemann-Pick type C 1 function requires lumenal domain residues that mediate cholesterol-dependent NPC2 binding. Proc. Natl. Acad. Sci. U.S.A. 108 18932-6 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 5.8 5.9 Garver, WS et al. (2000) Localization of the murine Niemann-Pick C1 protein to two distinct intracellular compartments. J. Lipid Res. 41 673-87 PubMed GONUTS page
- ↑ Ohsaki, Y et al. (2006) Cholesterol depletion facilitates ubiquitylation of NPC1 and its association with SKD1/Vps4. J. Cell. Sci. 119 2643-53 PubMed GONUTS page
- ↑ Kim, CE et al. (2010) A molecular mechanism underlying the neural-specific defect in torsinA mutant mice. Proc. Natl. Acad. Sci. U.S.A. 107 9861-6 PubMed GONUTS page
- ↑ Wang, MD et al. (2007) Different cellular traffic of LDL-cholesterol and acetylated LDL-cholesterol leads to distinct reverse cholesterol transport pathways. J. Lipid Res. 48 633-45 PubMed GONUTS page
- ↑ 9.0 9.1 Pacheco, CD et al. (2007) Autophagy in Niemann-Pick C disease is dependent upon Beclin-1 and responsive to lipid trafficking defects. Hum. Mol. Genet. 16 1495-503 PubMed GONUTS page
- ↑ 10.0 10.1 Pacheco, CD et al. (2009) Tau deletion exacerbates the phenotype of Niemann-Pick type C mice and implicates autophagy in pathogenesis. Hum. Mol. Genet. 18 956-65 PubMed GONUTS page
- ↑ te Vruchte, D et al. (2004) Accumulation of glycosphingolipids in Niemann-Pick C disease disrupts endosomal transport. J. Biol. Chem. 279 26167-75 PubMed GONUTS page
c
- GO:0071404 ! cellular response to low-density lipoprotein particle stimulus
- GO:0071383 ! cellular response to steroid hormone stimulus
- GO:0042632 ! cholesterol homeostasis
- GO:0030301 ! cholesterol transport
- GO:0015485 ! cholesterol binding
- GO:0033344 ! cholesterol efflux
- GO:0008203 ! cholesterol metabolic process
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