GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
MOUSE:HOME1
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Homer1 (synonyms: Vesl1) | |
Protein Name(s) | Homer protein homolog 1
Homer-1 VASP/Ena-related gene up-regulated during seizure and LTP 1 Vesl-1 | |
External Links | ||
UniProt | Q9Z2Y3 | |
EMBL | AF093257 AF093258 AY137385 AB019478 AB019479 AB089435 | |
CCDS | CCDS26687.1 CCDS36745.1 CCDS36746.1 CCDS70484.1 | |
RefSeq | NP_001271118.1 NP_036112.1 NP_671705.2 NP_687036.1 | |
UniGene | Mm.37533 | |
ProteinModelPortal | Q9Z2Y3 | |
SMR | Q9Z2Y3 | |
BioGrid | 205014 | |
IntAct | Q9Z2Y3 | |
MINT | MINT-3370083 | |
TCDB | 8.A.29.1.1 | |
PhosphoSite | Q9Z2Y3 | |
MaxQB | Q9Z2Y3 | |
PaxDb | Q9Z2Y3 | |
PRIDE | Q9Z2Y3 | |
Ensembl | ENSMUST00000060490 ENSMUST00000079086 ENSMUST00000080127 ENSMUST00000102752 ENSMUST00000109492 | |
GeneID | 26556 | |
KEGG | mmu:26556 | |
UCSC | uc007rlc.2 uc007rld.2 uc007rle.2 | |
CTD | 9456 | |
MGI | MGI:1347345 | |
eggNOG | NOG68331 | |
GeneTree | ENSGT00390000017850 | |
HOGENOM | HOG000006979 | |
HOVERGEN | HBG051918 | |
InParanoid | Q9Z2Y3 | |
KO | K15010 | |
OMA | QNSEPRP | |
PhylomeDB | Q9Z2Y3 | |
TreeFam | TF325627 | |
NextBio | 304603 | |
PRO | PR:Q9Z2Y3 | |
Proteomes | UP000000589 | |
Bgee | Q9Z2Y3 | |
CleanEx | MM_HOMER1 | |
ExpressionAtlas | Q9Z2Y3 | |
Genevestigator | Q9Z2Y3 | |
GO | GO:0045177 GO:0030424 GO:0030054 GO:0043034 GO:0005737 GO:0043198 GO:0060076 GO:0016020 GO:0043005 GO:0043025 GO:0097481 GO:0005886 GO:0045211 GO:0030018 GO:0048148 GO:0048875 GO:0007623 GO:0007216 GO:0051928 GO:0035418 GO:0090279 GO:2001257 GO:2001256 GO:0051592 GO:0035094 GO:0003009 GO:0048741 | |
Gene3D | 2.30.29.30 | |
InterPro | IPR011993 IPR000697 | |
Pfam | PF00568 | |
SMART | SM00461 | |
PROSITE | PS50229 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0014069 |
postsynaptic density |
ECO:0000315 |
C |
Figure 2A- from Synaptosomal fraction found in postsynaptic density fraction of wild type and adult heterozygous reeler mice |
complete | |||||
GO:0043005 |
neuron projection |
ECO:0000315 |
C |
Figure 2A- from Synaptosomal fraction found in postsynaptic density fraction of wild type and adult heterozygous reeler mice. |
complete | |||||
GO:0014069 |
postsynaptic density |
ECO:0000315 |
C |
Figure 6A and C, A decrease of PSD proteins in postsynaptic density fraction. There was a decrease in homer 1 protein in mutant Shank3 mice. Similar results was seen in figure 6E, confirmed by quantitative analyses. |
complete | |||||
part_of |
GO:0044309 |
neuron spine |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:1902950 |
regulation of dendritic spine maintenance |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051966 |
regulation of synaptic transmission, glutamatergic |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0005377)|part_of:(UBERON:0004167)|part_of:(UBERON:0007631) |
Seeded From UniProt |
complete | ||
part_of |
GO:0043005 |
neuron projection |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051262 |
protein tetramerization |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2001257 |
regulation of cation channel activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2001256 |
regulation of store-operated calcium entry |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0090279 |
regulation of calcium ion import |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0043005 |
neuron projection |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0002608) |
Seeded From UniProt |
complete | ||
part_of |
GO:0099524 |
postsynaptic cytosol |
ECO:0006042 |
cell fractionation evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0099524 |
postsynaptic cytosol |
ECO:0006003 |
electron microscopy evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0098978 |
glutamatergic synapse |
ECO:0006063 |
over expression analysis evidence used in manual assertion |
C |
part_of:(UBERON:0002037) |
Seeded From UniProt |
complete | ||
part_of |
GO:0098978 |
glutamatergic synapse |
ECO:0006013 |
patch-clamp recording evidence used in manual assertion |
C |
part_of:(UBERON:0002037) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0098962 |
regulation of postsynaptic neurotransmitter receptor activity |
ECO:0006063 |
over expression analysis evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0098962 |
regulation of postsynaptic neurotransmitter receptor activity |
ECO:0006013 |
patch-clamp recording evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:2001256 |
regulation of store-operated calcium entry |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1347345 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0043005 |
neuron projection |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1347345 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0035256 |
G protein-coupled glutamate receptor binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000857479 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0030425 |
dendrite |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000099620 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1347345 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007216 |
G protein-coupled glutamate receptor signaling pathway |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000857479 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1347345 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1347345 |
C |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:1902950 |
regulation of dendritic spine maintenance |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0099186 |
structural constituent of postsynapse |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0098978 |
glutamatergic synapse |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0098794 |
postsynapse |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0097110 |
scaffold protein binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0060090 |
molecular adaptor activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
F |
Seeded From UniProt |
complete | ||
colocalizes_with |
GO:0060076 |
excitatory synapse |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
C |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0051966 |
regulation of synaptic transmission, glutamatergic |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0051928 |
positive regulation of calcium ion transport |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:3526529 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0051592 |
response to calcium ion |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0051262 |
protein tetramerization |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0048875 |
chemical homeostasis within a tissue |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:3526529 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0048741 |
skeletal muscle fiber development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:3526529 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0048148 |
behavioral response to cocaine |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:3526529 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0046982 |
protein heterodimerization activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0045202 |
synapse |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0045177 |
apical part of cell |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
enables |
GO:0044325 |
ion channel binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0044309 |
neuron spine |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0043198 |
dendritic shaft |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0043034 |
costamere |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043025 |
neuronal cell body |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0043005 |
neuron projection |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0042802 |
identical protein binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
F |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0035418 |
protein localization to synapse |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0035256 |
G protein-coupled glutamate receptor binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0031802 |
type 5 metabotropic glutamate receptor binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0030425 |
dendrite |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0030424 |
axon |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030018 |
Z disc |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(EMAPA:35578) |
Seeded From UniProt |
complete | ||
part_of |
GO:0016020 |
membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
C |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0007216 |
G protein-coupled glutamate receptor signaling pathway |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0005102 |
signaling receptor binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:628725 |
F |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0003009 |
skeletal muscle contraction |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:3526529 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0099173 |
postsynapse organization |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0099186 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051592 |
response to calcium ion |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q86YM7 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0044325 |
ion channel binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q86YM7 |
F |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0007216 |
G protein-coupled glutamate receptor signaling pathway |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0030054 |
cell junction |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0042995 |
cell projection |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0045211 |
postsynaptic membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0045202 |
synapse |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043197 |
dendritic spine |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 Ventruti, A et al. (2011) Reelin deficiency causes specific defects in the molecular composition of the synapses in the adult brain. Neuroscience 189 32-42 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Wang, X et al. (2011) Synaptic dysfunction and abnormal behaviors in mice lacking major isoforms of Shank3. Hum. Mol. Genet. 20 3093-108 PubMed GONUTS page
- ↑ Dani, A et al. (2010) Superresolution imaging of chemical synapses in the brain. Neuron 68 843-56 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 Yuan, JP et al. (2003) Homer binds TRPC family channels and is required for gating of TRPC1 by IP3 receptors. Cell 114 777-89 PubMed GONUTS page
- ↑ Verpelli, C et al. (2011) Importance of Shank3 protein in regulating metabotropic glutamate receptor 5 (mGluR5) expression and signaling at synapses. J. Biol. Chem. 286 34839-50 PubMed GONUTS page
- ↑ 6.0 6.1 Tao-Cheng, JH et al. (2014) Homer is concentrated at the postsynaptic density and does not redistribute after acute synaptic stimulation. Neuroscience 266 80-90 PubMed GONUTS page
- ↑ 7.0 7.1 7.2 7.3 Ango, F et al. (2001) Agonist-independent activation of metabotropic glutamate receptors by the intracellular protein Homer. Nature 411 962-5 PubMed GONUTS page
- ↑ 8.0 8.1 8.2 8.3 8.4 8.5 8.6 8.7 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Herrera-Molina, R et al. (2014) Structure of excitatory synapses and GABAA receptor localization at inhibitory synapses are regulated by neuroplastin-65. J. Biol. Chem. 289 8973-88 PubMed GONUTS page
- ↑ 10.0 10.1 10.2 10.3 10.4 Stiber, JA et al. (2008) Mice lacking Homer 1 exhibit a skeletal myopathy characterized by abnormal transient receptor potential channel activity. Mol. Cell. Biol. 28 2637-47 PubMed GONUTS page
- ↑ 11.0 11.1 Szumlinski, KK et al. (2004) Homer proteins regulate sensitivity to cocaine. Neuron 43 401-13 PubMed GONUTS page
- ↑ Shin, DM et al. (2003) Homer 2 tunes G protein-coupled receptors stimulus intensity by regulating RGS proteins and PLCbeta GAP activities. J. Cell Biol. 162 293-303 PubMed GONUTS page
- ↑ 13.0 13.1 Wentzel, C et al. (2013) mSYD1A, a mammalian synapse-defective-1 protein, regulates synaptogenic signaling and vesicle docking. Neuron 78 1012-23 PubMed GONUTS page
- ↑ Nakamura, M et al. (2004) Signaling complex formation of phospholipase Cbeta4 with metabotropic glutamate receptor type 1alpha and 1,4,5-trisphosphate receptor at the perisynapse and endoplasmic reticulum in the mouse brain. Eur. J. Neurosci. 20 2929-44 PubMed GONUTS page
- ↑ Um, JW et al. (2014) Calsyntenins function as synaptogenic adhesion molecules in concert with neurexins. Cell Rep 6 1096-109 PubMed GONUTS page
- ↑ 16.0 16.1 Saito, H et al. (2002) An N-terminal sequence specific for a novel Homer1 isoform controls trafficking of group I metabotropic glutamate receptor in mammalian cells. Biochem. Biophys. Res. Commun. 296 523-9 PubMed GONUTS page
- ↑ Xiao, B et al. (1998) Homer regulates the association of group 1 metabotropic glutamate receptors with multivalent complexes of homer-related, synaptic proteins. Neuron 21 707-16 PubMed GONUTS page
c
g
m
p
- GO:0005886 ! plasma membrane
- GO:0051928 ! positive regulation of calcium ion transport
- GO:0098794 ! postsynapse
- GO:0099173 ! postsynapse organization
- GO:0099524 ! postsynaptic cytosol
- GO:0045211 ! postsynaptic membrane
- GO:0014069 ! postsynaptic density
- GO:0046982 ! protein heterodimerization activity
- GO:0035418 ! protein localization to synapse
- GO:0051262 ! protein tetramerization
r
- GO:2001257 ! regulation of cation channel activity
- GO:0051966 ! regulation of synaptic transmission, glutamatergic
- GO:1902950 ! regulation of dendritic spine maintenance
- GO:2001256 ! regulation of store-operated calcium entry
- GO:0090279 ! regulation of calcium ion import
- GO:0098962 ! regulation of postsynaptic neurotransmitter receptor activity
- GO:0051592 ! response to calcium ion
- Rodentia
s
t