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MOUSE:HOME1

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Species (Taxon ID) Mus musculus (Mouse). (10090)
Gene Name(s) Homer1 (synonyms: Vesl1)
Protein Name(s) Homer protein homolog 1

Homer-1 VASP/Ena-related gene up-regulated during seizure and LTP 1 Vesl-1

External Links
UniProt Q9Z2Y3
EMBL AF093257
AF093258
AY137385
AB019478
AB019479
AB089435
CCDS CCDS26687.1
CCDS36745.1
CCDS36746.1
CCDS70484.1
RefSeq NP_001271118.1
NP_036112.1
NP_671705.2
NP_687036.1
UniGene Mm.37533
ProteinModelPortal Q9Z2Y3
SMR Q9Z2Y3
BioGrid 205014
IntAct Q9Z2Y3
MINT MINT-3370083
TCDB 8.A.29.1.1
PhosphoSite Q9Z2Y3
MaxQB Q9Z2Y3
PaxDb Q9Z2Y3
PRIDE Q9Z2Y3
Ensembl ENSMUST00000060490
ENSMUST00000079086
ENSMUST00000080127
ENSMUST00000102752
ENSMUST00000109492
GeneID 26556
KEGG mmu:26556
UCSC uc007rlc.2
uc007rld.2
uc007rle.2
CTD 9456
MGI MGI:1347345
eggNOG NOG68331
GeneTree ENSGT00390000017850
HOGENOM HOG000006979
HOVERGEN HBG051918
InParanoid Q9Z2Y3
KO K15010
OMA QNSEPRP
PhylomeDB Q9Z2Y3
TreeFam TF325627
NextBio 304603
PRO PR:Q9Z2Y3
Proteomes UP000000589
Bgee Q9Z2Y3
CleanEx MM_HOMER1
ExpressionAtlas Q9Z2Y3
Genevestigator Q9Z2Y3
GO GO:0045177
GO:0030424
GO:0030054
GO:0043034
GO:0005737
GO:0043198
GO:0060076
GO:0016020
GO:0043005
GO:0043025
GO:0097481
GO:0005886
GO:0045211
GO:0030018
GO:0048148
GO:0048875
GO:0007623
GO:0007216
GO:0051928
GO:0035418
GO:0090279
GO:2001257
GO:2001256
GO:0051592
GO:0035094
GO:0003009
GO:0048741
Gene3D 2.30.29.30
InterPro IPR011993
IPR000697
Pfam PF00568
SMART SM00461
PROSITE PS50229

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0014069

postsynaptic density

PMID:21664258[1]

ECO:0000315

C

Figure 2A- from Synaptosomal fraction found in postsynaptic density fraction of wild type and adult heterozygous reeler mice

complete
CACAO 2357

GO:0043005

neuron projection

PMID:21664258[1]

ECO:0000315

C

Figure 2A- from Synaptosomal fraction found in postsynaptic density fraction of wild type and adult heterozygous reeler mice.

complete
CACAO 2358

GO:0014069

postsynaptic density

PMID:21558424[2]

ECO:0000315

C

Figure 6A and C, A decrease of PSD proteins in postsynaptic density fraction. There was a decrease in homer 1 protein in mutant Shank3 mice. Similar results was seen in figure 6E, confirmed by quantitative analyses.

complete
CACAO 3129

part_of

GO:0044309

neuron spine

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9Z214-2

C

Seeded From UniProt

complete

involved_in

GO:1902950

regulation of dendritic spine maintenance

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9Z214-2

P

Seeded From UniProt

complete

involved_in

GO:0051966

regulation of synaptic transmission, glutamatergic

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9Z214-2

P

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

PMID:21144999[3]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(UBERON:0005377)|part_of:(UBERON:0004167)|part_of:(UBERON:0007631)

Seeded From UniProt

complete

part_of

GO:0043005

neuron projection

PMID:21664258[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

PMID:21558424[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

PMID:21664258[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0051262

protein tetramerization

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9Z214-2

P

Seeded From UniProt

complete

involved_in

GO:2001257

regulation of cation channel activity

PMID:14505576[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:2001256

regulation of store-operated calcium entry

PMID:14505576[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

PMID:21558424[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

PMID:21664258[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0090279

regulation of calcium ion import

PMID:14505576[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0043005

neuron projection

PMID:21795692[5]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(CL:0002608)

Seeded From UniProt

complete

part_of

GO:0099524

postsynaptic cytosol

PMID:24530450[6]

ECO:0006042

cell fractionation evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0099524

postsynaptic cytosol

PMID:24530450[6]

ECO:0006003

electron microscopy evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0098978

glutamatergic synapse

PMID:11418862[7]

ECO:0006063

over expression analysis evidence used in manual assertion

C

part_of:(UBERON:0002037)

Seeded From UniProt

complete

part_of

GO:0098978

glutamatergic synapse

PMID:11418862[7]

ECO:0006013

patch-clamp recording evidence used in manual assertion

C

part_of:(UBERON:0002037)

Seeded From UniProt

complete

involved_in

GO:0098962

regulation of postsynaptic neurotransmitter receptor activity

PMID:11418862[7]

ECO:0006063

over expression analysis evidence used in manual assertion

P

  • occurs_in:(GO:0098978)
  • occurs_in:(UBERON:0000061)
  • occurs_in:(UBERON:0002037)

Seeded From UniProt

complete

involved_in

GO:0098962

regulation of postsynaptic neurotransmitter receptor activity

PMID:11418862[7]

ECO:0006013

patch-clamp recording evidence used in manual assertion

P

  • occurs_in:(GO:0098978)
  • occurs_in:(UBERON:0000061)
  • occurs_in:(UBERON:0002037)

Seeded From UniProt

complete

involved_in

GO:2001256

regulation of store-operated calcium entry

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1347345
PANTHER:PTN000857479

P

Seeded From UniProt

complete

part_of

GO:0043005

neuron projection

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1347345
PANTHER:PTN000099620
RGD:628725

C

Seeded From UniProt

complete

enables

GO:0035256

G protein-coupled glutamate receptor binding

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000857479
RGD:620705
RGD:628725

F

Seeded From UniProt

complete

part_of

GO:0030425

dendrite

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000099620
RGD:620705
RGD:628725

C

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1347345
MGI:MGI:1347359
PANTHER:PTN000099620
RGD:628725

C

Seeded From UniProt

complete

involved_in

GO:0007216

G protein-coupled glutamate receptor signaling pathway

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000857479
RGD:628725

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1347345
PANTHER:PTN000857479

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1347345
MGI:MGI:1347354
PANTHER:PTN000857479
UniProtKB:Q9NSB8

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:1902950

regulation of dendritic spine maintenance

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

P

Seeded From UniProt

complete

enables

GO:0099186

structural constituent of postsynapse

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

F

Seeded From UniProt

complete

part_of

GO:0098978

glutamatergic synapse

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

C

Seeded From UniProt

complete

part_of

GO:0098794

postsynapse

PMID:24554721[9]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0097110

scaffold protein binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

F

Seeded From UniProt

complete

enables

GO:0060090

molecular adaptor activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

F

Seeded From UniProt

complete

colocalizes_with

GO:0060076

excitatory synapse

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051966

regulation of synaptic transmission, glutamatergic

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051928

positive regulation of calcium ion transport

PMID:18268005[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:3526529

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051592

response to calcium ion

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q86YM7

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051262

protein tetramerization

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0048875

chemical homeostasis within a tissue

PMID:15294147[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:3526529

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0048741

skeletal muscle fiber development

PMID:18268005[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:3526529

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0048148

behavioral response to cocaine

PMID:15294147[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:3526529

P

Seeded From UniProt

complete

enables

GO:0046982

protein heterodimerization activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

F

Seeded From UniProt

complete

part_of

GO:0045202

synapse

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

C

Seeded From UniProt

complete

part_of

GO:0045177

apical part of cell

PMID:12860966[12]

ECO:0000314

direct assay evidence used in manual assertion

C

  • part_of:(EMAPA:35651)
  • part_of:(CL:0002064)

Seeded From UniProt

complete

enables

GO:0044325

ion channel binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q86YM7

F

Seeded From UniProt

complete

part_of

GO:0044309

neuron spine

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

C

Seeded From UniProt

complete

part_of

GO:0043198

dendritic shaft

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

C

Seeded From UniProt

complete

part_of

GO:0043034

costamere

PMID:18268005[10]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0043025

neuronal cell body

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

C

Seeded From UniProt

complete

part_of

GO:0043005

neuron projection

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

C

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0035418

protein localization to synapse

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

P

Seeded From UniProt

complete

enables

GO:0035256

G protein-coupled glutamate receptor binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

F

Seeded From UniProt

complete

enables

GO:0031802

type 5 metabotropic glutamate receptor binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

F

Seeded From UniProt

complete

part_of

GO:0030425

dendrite

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

C

Seeded From UniProt

complete

part_of

GO:0030424

axon

PMID:23791195[13]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0030018

Z disc

PMID:18268005[10]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(EMAPA:35578)

Seeded From UniProt

complete

part_of

GO:0016020

membrane

PMID:15579147[14]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

PMID:24613359[15]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

PMID:23791195[13]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007216

G protein-coupled glutamate receptor signaling pathway

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:12176012[16]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:12176012[16]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0005102

signaling receptor binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:628725

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0003009

skeletal muscle contraction

PMID:18268005[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:3526529

P

Seeded From UniProt

complete

involved_in

GO:0099173

postsynapse organization

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0099186

P

Seeded From UniProt

complete

involved_in

GO:0051592

response to calcium ion

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q86YM7
ensembl:ENSP00000334382

P

Seeded From UniProt

complete

enables

GO:0044325

ion channel binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q86YM7
ensembl:ENSP00000334382

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007216

G protein-coupled glutamate receptor signaling pathway

PMID:9808458[17]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0030054

cell junction

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0965

C

Seeded From UniProt

complete

part_of

GO:0042995

cell projection

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0966

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

part_of

GO:0045211

postsynaptic membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0628

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

part_of

GO:0045202

synapse

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0770
UniProtKB-SubCell:SL-0258

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1003

C

Seeded From UniProt

complete

part_of

GO:0043197

dendritic spine

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0284

C

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0297

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 1.4 Ventruti, A et al. (2011) Reelin deficiency causes specific defects in the molecular composition of the synapses in the adult brain. Neuroscience 189 32-42 PubMed GONUTS page
  2. 2.0 2.1 2.2 Wang, X et al. (2011) Synaptic dysfunction and abnormal behaviors in mice lacking major isoforms of Shank3. Hum. Mol. Genet. 20 3093-108 PubMed GONUTS page
  3. Dani, A et al. (2010) Superresolution imaging of chemical synapses in the brain. Neuron 68 843-56 PubMed GONUTS page
  4. 4.0 4.1 4.2 Yuan, JP et al. (2003) Homer binds TRPC family channels and is required for gating of TRPC1 by IP3 receptors. Cell 114 777-89 PubMed GONUTS page
  5. Verpelli, C et al. (2011) Importance of Shank3 protein in regulating metabotropic glutamate receptor 5 (mGluR5) expression and signaling at synapses. J. Biol. Chem. 286 34839-50 PubMed GONUTS page
  6. 6.0 6.1 Tao-Cheng, JH et al. (2014) Homer is concentrated at the postsynaptic density and does not redistribute after acute synaptic stimulation. Neuroscience 266 80-90 PubMed GONUTS page
  7. 7.0 7.1 7.2 7.3 Ango, F et al. (2001) Agonist-independent activation of metabotropic glutamate receptors by the intracellular protein Homer. Nature 411 962-5 PubMed GONUTS page
  8. 8.0 8.1 8.2 8.3 8.4 8.5 8.6 8.7 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  9. Herrera-Molina, R et al. (2014) Structure of excitatory synapses and GABAA receptor localization at inhibitory synapses are regulated by neuroplastin-65. J. Biol. Chem. 289 8973-88 PubMed GONUTS page
  10. 10.0 10.1 10.2 10.3 10.4 Stiber, JA et al. (2008) Mice lacking Homer 1 exhibit a skeletal myopathy characterized by abnormal transient receptor potential channel activity. Mol. Cell. Biol. 28 2637-47 PubMed GONUTS page
  11. 11.0 11.1 Szumlinski, KK et al. (2004) Homer proteins regulate sensitivity to cocaine. Neuron 43 401-13 PubMed GONUTS page
  12. Shin, DM et al. (2003) Homer 2 tunes G protein-coupled receptors stimulus intensity by regulating RGS proteins and PLCbeta GAP activities. J. Cell Biol. 162 293-303 PubMed GONUTS page
  13. 13.0 13.1 Wentzel, C et al. (2013) mSYD1A, a mammalian synapse-defective-1 protein, regulates synaptogenic signaling and vesicle docking. Neuron 78 1012-23 PubMed GONUTS page
  14. Nakamura, M et al. (2004) Signaling complex formation of phospholipase Cbeta4 with metabotropic glutamate receptor type 1alpha and 1,4,5-trisphosphate receptor at the perisynapse and endoplasmic reticulum in the mouse brain. Eur. J. Neurosci. 20 2929-44 PubMed GONUTS page
  15. Um, JW et al. (2014) Calsyntenins function as synaptogenic adhesion molecules in concert with neurexins. Cell Rep 6 1096-109 PubMed GONUTS page
  16. 16.0 16.1 Saito, H et al. (2002) An N-terminal sequence specific for a novel Homer1 isoform controls trafficking of group I metabotropic glutamate receptor in mammalian cells. Biochem. Biophys. Res. Commun. 296 523-9 PubMed GONUTS page
  17. Xiao, B et al. (1998) Homer regulates the association of group 1 metabotropic glutamate receptors with multivalent complexes of homer-related, synaptic proteins. Neuron 21 707-16 PubMed GONUTS page