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MOUSE:CO6A6
Contents
| Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
| Gene Name(s) | Col6a6 | |
| Protein Name(s) | Collagen alpha-6(VI) chain | |
| External Links | ||
| UniProt | Q8C6K9 | |
| EMBL | AM748259 AM748260 AM748261 AM748262 AK054356 | |
| CCDS | CCDS23468.1 CCDS52906.1 | |
| RefSeq | NP_001096077.1 NP_766515.2 | |
| UniGene | Mm.482507 | |
| ProteinModelPortal | Q8C6K9 | |
| SMR | Q8C6K9 | |
| PhosphoSite | Q8C6K9 | |
| MaxQB | Q8C6K9 | |
| PaxDb | Q8C6K9 | |
| PRIDE | Q8C6K9 | |
| Ensembl | ENSMUST00000060896 ENSMUST00000098441 | |
| GeneID | 245026 | |
| KEGG | mmu:245026 | |
| UCSC | uc009ris.1 uc009rit.1 | |
| CTD | 131873 | |
| MGI | MGI:2444259 | |
| eggNOG | NOG237718 | |
| GeneTree | ENSGT00760000119051 | |
| HOGENOM | HOG000111864 | |
| HOVERGEN | HBG107743 | |
| InParanoid | Q8C6K9 | |
| KO | K06238 | |
| PhylomeDB | Q8C6K9 | |
| Reactome | REACT_199055 | |
| NextBio | 386530 | |
| PRO | PR:Q8C6K9 | |
| Proteomes | UP000000589 | |
| Bgee | Q8C6K9 | |
| ExpressionAtlas | Q8C6K9 | |
| Genevestigator | Q8C6K9 | |
| GO | GO:0005581 GO:0031012 GO:0005576 GO:0005578 GO:0007155 | |
| Gene3D | 3.40.50.410 | |
| InterPro | IPR008160 IPR002035 | |
| Pfam | PF01391 PF00092 | |
| SMART | SM00327 | |
| SUPFAM | SSF53300 | |
| PROSITE | PS50234 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0062023 |
collagen-containing extracellular matrix |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0000006) |
Seeded From UniProt |
complete | ||
|
enables |
GO:0030020 |
extracellular matrix structural constituent conferring tensile strength |
ECO:0007666 |
automatically integrated combinatorial computational and experimental evidence used in manual assertion |
F |
occurs_in:(UBERON:0000006) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0031012 |
extracellular matrix |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005576 |
extracellular region |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(EMAPA:19134) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0031012 |
extracellular matrix |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:A6NMZ7 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005576 |
extracellular region |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007155 |
cell adhesion |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005581 |
collagen trimer |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Naba, A et al. (2017) Quantitative proteomic profiling of the extracellular matrix of pancreatic islets during the angiogenic switch and insulinoma progression. Sci Rep 7 40495 PubMed GONUTS page
- ↑ Fitzgerald, J et al. (2008) Three novel collagen VI chains, alpha4(VI), alpha5(VI), and alpha6(VI). J. Biol. Chem. 283 20170-80 PubMed GONUTS page
- ↑ Pan, TC et al. (2014) A mouse model for dominant collagen VI disorders: heterozygous deletion of Col6a3 Exon 16. J. Biol. Chem. 289 10293-307 PubMed GONUTS page
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