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MOUSE:BGH3

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Species (Taxon ID) Mus musculus (Mouse). (10090)
Gene Name(s) Tgfbi
Protein Name(s) Transforming growth factor-beta-induced protein ig-h3

Beta ig-h3

External Links
UniProt P82198
EMBL L19932
AK084431
AK142323
AK151680
AK152365
AK155572
AK155828
AK170495
CCDS CCDS36680.1
RefSeq NP_033395.1
UniGene Mm.14455
ProteinModelPortal P82198
SMR P82198
IntAct P82198
MINT MINT-4106293
PhosphoSite P82198
MaxQB P82198
PaxDb P82198
PRIDE P82198
Ensembl ENSMUST00000045173
GeneID 21810
KEGG mmu:21810
UCSC uc011zae.1
CTD 7045
MGI MGI:99959
eggNOG COG2335
GeneTree ENSGT00530000063860
HOGENOM HOG000220865
HOVERGEN HBG000715
InParanoid P82198
OMA KNHILKS
OrthoDB EOG7N8ZV1
PhylomeDB P82198
TreeFam TF316269
Reactome REACT_198563
NextBio 301198
PRO PR:P82198
Proteomes UP000000589
Bgee P82198
CleanEx MM_TGFBI
ExpressionAtlas P82198
Genevestigator P82198
GO GO:0005604
GO:0005615
GO:0070062
GO:0005578
GO:0005802
GO:0050840
GO:0001525
GO:0007155
GO:0002062
GO:0030198
Gene3D 2.30.180.10
InterPro IPR011489
IPR000782
IPR016666
Pfam PF02469
PIRSF PIRSF016553
SMART SM00554
SUPFAM SSF82153
PROSITE PS51041
PS50213

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0062023

collagen-containing extracellular matrix

PMID:28071719[1]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

part_of:(UBERON:0000006)

Seeded From UniProt

complete

enables

GO:0005201

extracellular matrix structural constituent

PMID:28071719[1]

ECO:0007666

automatically integrated combinatorial computational and experimental evidence used in manual assertion

F

occurs_in:(UBERON:0000006)

Seeded From UniProt

complete

part_of

GO:0062023

collagen-containing extracellular matrix

PMID:22159717[2]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

part_of:(UBERON:0002048)|part_of:(UBERON:0001155)

Seeded From UniProt

complete

enables

GO:0005201

extracellular matrix structural constituent

PMID:22159717[2]

ECO:0007666

automatically integrated combinatorial computational and experimental evidence used in manual assertion

F

occurs_in:(UBERON:0002048)|occurs_in:(UBERON:0001155)

Seeded From UniProt

complete

part_of

GO:0005615

extracellular space

PMID:24006456[3]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

produced_by:(CL:0002548)

Seeded From UniProt

complete

enables

GO:0050839

cell adhesion molecule binding

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0262742
PANTHER:PTN000855676

F

Seeded From UniProt

complete

part_of

GO:0031012

extracellular matrix

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1926321
MGI:MGI:99959
PANTHER:PTN000855676

C

Seeded From UniProt

complete

involved_in

GO:0030198

extracellular matrix organization

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1926321
MGI:MGI:99959
PANTHER:PTN000855676

P

Seeded From UniProt

complete

involved_in

GO:0007155

cell adhesion

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1926321
MGI:MGI:99959
PANTHER:PTN000855676
UniProtKB:Q15063

P

Seeded From UniProt

complete

part_of

GO:0005615

extracellular space

PMID:21873635[4]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:99959
PANTHER:PTN000096377
RGD:1305285
UniProtKB:Q15582

C

Seeded From UniProt

complete

enables

GO:0050840

extracellular matrix binding

PMID:18757743[5]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0031012

extracellular matrix

PMID:12963107[6]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0030198

extracellular matrix organization

PMID:18757743[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007155

cell adhesion

PMID:12963107[6]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005802

trans-Golgi network

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q15582

C

Seeded From UniProt

complete

part_of

GO:0005615

extracellular space

PMID:12838408[7]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005615

extracellular space

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q15582

C

Seeded From UniProt

complete

part_of

GO:0005604

basement membrane

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:620017

C

Seeded From UniProt

complete

enables

GO:0005518

collagen binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q15582

F

Seeded From UniProt

complete

part_of

GO:0005604

basement membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:D4A8G5
ensembl:ENSRNOP00000016389

C

Seeded From UniProt

complete

involved_in

GO:0002062

chondrocyte differentiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:D4A8G5
ensembl:ENSRNOP00000016389

P

Seeded From UniProt

complete

part_of

GO:0005802

trans-Golgi network

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q15582
ensembl:ENSP00000416330

C

Seeded From UniProt

complete

part_of

GO:0005615

extracellular space

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q15582
ensembl:ENSP00000416330

C

Seeded From UniProt

complete

enables

GO:0005518

collagen binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q15582
ensembl:ENSP00000416330

F

Seeded From UniProt

complete

involved_in

GO:0001525

angiogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q15582
ensembl:ENSP00000416330

P

Seeded From UniProt

complete

enables

GO:0005178

integrin binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR032954

F

Seeded From UniProt

complete

enables

GO:0005518

collagen binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR032954

F

Seeded From UniProt

complete

involved_in

GO:0007155

cell adhesion

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR032954

P

Seeded From UniProt

complete

involved_in

GO:0008283

cell population proliferation

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR032954

P

Seeded From UniProt

complete

enables

GO:0050840

extracellular matrix binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR032954

F

Seeded From UniProt

complete

part_of

GO:0005576

extracellular region

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0964
UniProtKB-SubCell:SL-0243

C

Seeded From UniProt

complete

involved_in

GO:0007155

cell adhesion

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0130

P

Seeded From UniProt

complete

edit table

Notes

References

See Help:References for how to manage references in GONUTS.

  1. ↑ 1.0 1.1 Naba, A et al. (2017) Quantitative proteomic profiling of the extracellular matrix of pancreatic islets during the angiogenic switch and insulinoma progression. Sci Rep 7 40495 PubMed GONUTS page
  2. ↑ 2.0 2.1 Naba, A et al. (2012) The matrisome: in silico definition and in vivo characterization by proteomics of normal and tumor extracellular matrices. Mol. Cell Proteomics 11 M111.014647 PubMed GONUTS page
  3. ↑ Abonnenc, M et al. (2013) Extracellular matrix secretion by cardiac fibroblasts: role of microRNA-29b and microRNA-30c. Circ. Res. 113 1138-47 PubMed GONUTS page
  4. ↑ 4.0 4.1 4.2 4.3 4.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  5. ↑ 5.0 5.1 Manabe, R et al. (2008) Transcriptome-based systematic identification of extracellular matrix proteins. Proc. Natl. Acad. Sci. U.S.A. 105 12849-54 PubMed GONUTS page
  6. ↑ 6.0 6.1 Ferguson, JW et al. (2003) Developmental expression patterns of Beta-ig (betaIG-H3) and its function as a cell adhesion protein. Mech. Dev. 120 851-64 PubMed GONUTS page
  7. ↑ Ferguson, JW et al. (2003) The extracellular matrix protein betaIG-H3 is expressed at myotendinous junctions and supports muscle cell adhesion. Cell Tissue Res. 313 93-105 PubMed GONUTS page
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