GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
MOUSE:AHI1
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Ahi1 | |
Protein Name(s) | Jouberin
Abelson helper integration site 1 protein AHI-1 | |
External Links | ||
UniProt | Q8K3E5 | |
EMBL | AY133241 BC055400 AK005991 | |
CCDS | CCDS35860.1 | |
RefSeq | XP_006512862.1 | |
UniGene | Mm.253280 Mm.486431 | |
ProteinModelPortal | Q8K3E5 | |
SMR | Q8K3E5 | |
IntAct | Q8K3E5 | |
PhosphoSite | Q8K3E5 | |
MaxQB | Q8K3E5 | |
PaxDb | Q8K3E5 | |
PRIDE | Q8K3E5 | |
GeneID | 52906 | |
KEGG | mmu:52906 | |
CTD | 54806 | |
MGI | MGI:87971 | |
eggNOG | COG2319 | |
HOGENOM | HOG000033864 | |
HOVERGEN | HBG080824 | |
InParanoid | Q8K3E5 | |
KO | K16740 | |
PhylomeDB | Q8K3E5 | |
ChiTaRS | Ahi1 | |
PRO | PR:Q8K3E5 | |
Proteomes | UP000000589 | |
CleanEx | MM_AHI1 | |
Genevestigator | Q8K3E5 | |
GO | GO:0005912 GO:0005911 GO:0005814 GO:0005813 GO:0036064 GO:0005929 GO:0031513 GO:0001750 GO:0072372 GO:0036038 GO:0034613 GO:0007417 GO:0042384 GO:0060271 GO:0035844 GO:0001947 GO:0030902 GO:0070121 GO:0070986 GO:0001738 GO:0043066 GO:0071599 GO:0035845 GO:0010628 GO:0030862 GO:0002092 GO:0045944 GO:0039023 GO:0039008 GO:0033365 GO:0050795 GO:0060041 GO:0010842 GO:0065001 GO:0007169 GO:0006903 GO:0016192 | |
Gene3D | 2.130.10.10 | |
InterPro | IPR001452 IPR015943 IPR001680 IPR017986 | |
Pfam | PF00018 PF00400 | |
PRINTS | PR00452 | |
SMART | SM00326 SM00320 | |
SUPFAM | SSF50044 SSF50978 | |
PROSITE | PS50002 PS50082 PS50294 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0005929 |
cilium |
ECO:0000314 |
C |
Figure 1 (e): Endogenous Ahi1 localization is shown in red to the base of photoreceptor connecting cillium (acetylated-tubulin: green) in Ahi1 +/- section and is absent in Ahi1 -/- Cillium. |
complete | |||||
GO:0046548 |
retinal rod cell development |
ECO:0000315 |
P |
Supplementary figure 2 (a): Transmission electron microscopy showed complete absence of both rod and cone outer segments indicating Ahi1 role in rod and cone cell development. EM longitudinal views of representative Ahi1+/- control and multiple Ahi1-/- photoreceptor cilia demonstrate absence of outer segment disks. OS=outer segments, CC=connecting cilium (and indicated by black lines), brackets indicate OS in control and disorganized membranes in the Ahi1-/-, scale=1μm |
complete | |||||
GO:0046549 |
retinal cone cell development |
ECO:0000315 |
P |
Supplementary figure 2 (a): Transmission electron microscopy showed complete absence of both rod and cone outer segments by P10, indicating a role for Ahi1 in rod and cone cell development. |
complete | |||||
GO:0042462 |
eye photoreceptor cell development |
ECO:0000314 |
P |
Figure 5 (d): The photoreceptors of Nphp1- /-mice formed outer segments but underwent gradual retinal degeneration, which was slightly evident at 2 months. Figure shows Nphp1+/+ and Nphp1-/- retina at 8 wks stained for opsin and nuclei (Hoescht 33342). Scale=20μm |
complete | |||||
GO:0050708 |
regulation of protein secretion |
ECO:0000315 |
P |
Using anti-Hap1 that recognizes endogenous Hap1 in PC12 cells of rat origin, we found that transfected Ahi1 increased the level of endogenous Hap1A and Hap1B in a dose-dependent manner (Figure 3, F and G). |
complete | |||||
GO:0010976 |
positive regulation of neuron projection development |
ECO:0000315 |
P |
Expression of truncated Ahi1 with Hap1B inhibited neurite outgrowth of PC12 cells compared with cells coexpressing full-length Ahi1. To confirm this inhibitory effect, we transfected full-length or truncated Ahi1 alone into PC12 cells (Figure 4D). Counting of the transfected cells revealed that 55.3% ± 3.5% of full-length Ahi1 and 15% ± 2.1% (mean ± SEM; |
complete | |||||
GO:0045927 |
positive regulation of growth |
ECO:0000314 |
P |
Figure 1 B Table I. |
complete | |||||
involved_in |
GO:0045927 |
positive regulation of growth |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042462 |
eye photoreceptor cell development |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010976 |
positive regulation of neuron projection development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050708 |
regulation of protein secretion |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0046549 |
retinal cone cell development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0046548 |
retinal rod cell development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005929 |
cilium |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005929 |
cilium |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071599 |
otic vesicle development |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0070986 |
left/right axis specification |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0070121 |
Kupffer's vesicle development |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0065001 |
specification of axis polarity |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0060271 |
cilium assembly |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050795 |
regulation of behavior |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
has_regulation_target:(UniProtKB:O35668)|has_regulation_target:(UniProtKB:P15209) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043066 |
negative regulation of apoptotic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0060271 |
cilium assembly |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0039023 |
pronephric duct morphogenesis |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0039008 |
pronephric nephron tubule morphogenesis |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0036064 |
ciliary basal body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0001789) |
Seeded From UniProt |
complete | ||
part_of |
GO:0036064 |
ciliary basal body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0036064 |
ciliary basal body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0036038 |
MKS complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035845 |
photoreceptor cell outer segment organization |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035844 |
cloaca development |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034613 |
cellular protein localization |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
has_input:(UniProtKB:P15409) |
Seeded From UniProt |
complete | ||
part_of |
GO:0097730 |
non-motile cilium |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0097730 |
non-motile cilium |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030902 |
hindbrain development |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030862 |
positive regulation of polarized epithelial cell differentiation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0016192 |
vesicle-mediated transport |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010842 |
retina layer formation |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007417 |
central nervous system development |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007169 |
transmembrane receptor protein tyrosine kinase signaling pathway |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005929 |
cilium |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0001789) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005929 |
cilium |
ECO:0000305 |
curator inference used in manual assertion |
GO:0060271 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005912 |
adherens junction |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005911 |
cell-cell junction |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005814 |
centriole |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000020) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005813 |
centrosome |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0002092 |
positive regulation of receptor internalization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
has_regulation_target:(UniProtKB:P15209) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001947 |
heart looping |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0001738 |
morphogenesis of a polarized epithelium |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(CL:0002518) |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:1905515 |
non-motile cilium assembly |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(EMAPA:28370) |
Seeded From UniProt |
complete | ||
part_of |
GO:0097730 |
non-motile cilium |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(EMAPA:28370) |
Seeded From UniProt |
complete | ||
part_of |
GO:0097730 |
non-motile cilium |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(EMAPA:28370) |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0060271 |
cilium assembly |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:4360696 |
P |
occurs_in:(CL:0000210) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0060041 |
retina development in camera-type eye |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:4360696 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0046325 |
negative regulation of glucose import |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:1303040 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0042802 |
identical protein binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0036064 |
ciliary basal body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(EMAPA:28370) |
Seeded From UniProt |
complete | ||
part_of |
GO:0036064 |
ciliary basal body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(EMAPA:28370) |
Seeded From UniProt |
complete | ||
part_of |
GO:0036064 |
ciliary basal body |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0036038 |
MKS complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0035845 |
photoreceptor cell outer segment organization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:4360696 |
P |
occurs_in:(CL:0000210) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0033365 |
protein localization to organelle |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0016192 |
vesicle-mediated transport |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(EMAPA:28370) |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0010628 |
positive regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:4360696 |
P |
has_regulation_target:(MGI:MGI:97998)|has_regulation_target:(MGI:MGI:95778)|has_regulation_target:(MGI:MGI:96960) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0006903 |
vesicle targeting |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:4360696 |
P |
occurs_in:(CL:0000210) |
Seeded From UniProt |
complete | |
part_of |
GO:0005929 |
cilium |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005912 |
adherens junction |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005911 |
cell-cell junction |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005814 |
centriole |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000020)|part_of:(EMAPA:28370) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005813 |
centrosome |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:1303040 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0001750 |
photoreceptor outer segment |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000210) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030154 |
cell differentiation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0042995 |
cell projection |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007275 |
multicellular organism development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005856 |
cytoskeleton |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005929 |
cilium |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030054 |
cell junction |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030030 |
cell projection organization |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005814 |
centriole |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005912 |
adherens junction |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 Louie, CM et al. (2010) AHI1 is required for photoreceptor outer segment development and is a modifier for retinal degeneration in nephronophthisis. Nat. Genet. 42 175-80 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 Sheng, G et al. (2008) Huntingtin-associated protein 1 interacts with Ahi1 to regulate cerebellar and brainstem development in mice. J. Clin. Invest. 118 2785-95 PubMed GONUTS page
- ↑ 3.0 3.1 Zhou, LL et al. (2008) AHI-1 interacts with BCR-ABL and modulates BCR-ABL transforming activity and imatinib response of CML stem/progenitor cells. J. Exp. Med. 205 2657-71 PubMed GONUTS page
- ↑ 4.00 4.01 4.02 4.03 4.04 4.05 4.06 4.07 4.08 4.09 4.10 4.11 Simms, RJ et al. (2012) Modelling a ciliopathy: Ahi1 knockdown in model systems reveals an essential role in brain, retinal, and renal development. Cell. Mol. Life Sci. 69 993-1009 PubMed GONUTS page
- ↑ 5.00 5.01 5.02 5.03 5.04 5.05 5.06 5.07 5.08 5.09 5.10 Hsiao, YC et al. (2009) Ahi1, whose human ortholog is mutated in Joubert syndrome, is required for Rab8a localization, ciliogenesis and vesicle trafficking. Hum. Mol. Genet. 18 3926-41 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 6.3 Xu, X et al. (2010) Neuronal Abelson helper integration site-1 (Ahi1) deficiency in mice alters TrkB signaling with a depressive phenotype. Proc. Natl. Acad. Sci. U.S.A. 107 19126-31 PubMed GONUTS page
- ↑ 7.0 7.1 7.2 7.3 Lancaster, MA et al. (2009) Impaired Wnt-beta-catenin signaling disrupts adult renal homeostasis and leads to cystic kidney ciliopathy. Nat. Med. 15 1046-54 PubMed GONUTS page
- ↑ 8.0 8.1 Chih, B et al. (2012) A ciliopathy complex at the transition zone protects the cilia as a privileged membrane domain. Nat. Cell Biol. 14 61-72 PubMed GONUTS page
- ↑ 9.0 9.1 9.2 9.3 9.4 9.5 Westfall, JE et al. (2010) Retinal degeneration and failure of photoreceptor outer segment formation in mice with targeted deletion of the Joubert syndrome gene, Ahi1. J. Neurosci. 30 8759-68 PubMed GONUTS page
c
- GO:0005911 ! cell-cell junction
- GO:0034613 ! cellular protein localization
- GO:0030154 ! cell differentiation
- GO:0030054 ! cell junction
- GO:0042995 ! cell projection
- GO:0030030 ! cell projection organization
- GO:0007169 ! cell surface receptor protein tyrosine kinase signaling pathway
- GO:0007417 ! central nervous system development
- GO:0005814 ! centriole
- GO:0005813 ! centrosome
- Chordata
- GO:0036064 ! ciliary basal body
- GO:0005929 ! cilium
- GO:0060271 ! cilium assembly
- GO:0035844 ! cloaca development
- Craniata
- GO:0005737 ! cytoplasm
- GO:0005856 ! cytoskeleton
g
m
n
p
- GO:0001750 ! photoreceptor outer segment
- GO:0035845 ! photoreceptor cell outer segment organization
- GO:0002092 ! positive regulation of receptor internalization
- GO:0010628 ! positive regulation of gene expression
- GO:0010976 ! positive regulation of neuron projection development
- GO:0045927 ! positive regulation of growth
- GO:0045944 ! positive regulation of transcription by RNA polymerase II
- GO:0030862 ! positive regulation of polarized epithelial cell differentiation
- GO:0039023 ! pronephric duct morphogenesis
- GO:0039008 ! pronephric nephron tubule morphogenesis
- GO:0033365 ! protein localization to organelle
r