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MAIZE:RIBRX
Contents
| Species (Taxon ID) | Zea mays (Maize). (4577) | |
| Gene Name(s) | PYRR | |
| Protein Name(s) | Riboflavin biosynthesis protein PYRR, chloroplastic
Inactive diaminohydroxyphosphoribosylaminopyrimidine deaminase DRAP deaminase Riboflavin-specific deaminase 5-amino-6-(5-phosphoribosylamino)uracil reductase HTP reductase Riboflavin biosynthesis intermediates N-glycosidase (ECO:0000305 with PMID:25431972[1]) | |
| External Links | ||
| UniProt | K7WIZ6 | |
| EMBL | JX838796 | |
| RefSeq | NP_001266474.1 | |
| UniGene | Zm.126241 | |
| ProteinModelPortal | K7WIZ6 | |
| STRING | 4577.GRMZM2G090068_P01 | |
| PaxDb | K7WIZ6 | |
| EnsemblPlants | [example_ID GRMZM2G090068_T01] | |
| GeneID | 101202729 | |
| Gramene | GRMZM2G090068_T01 | |
| KEGG | zma:101202729 | |
| eggNOG | ENOG410IU3U ENOG410JSA8 COG0117 COG1985 COG3236 | |
| KO | K11752 | |
| OMA | DCYGDST | |
| UniPathway | UPA00275 | |
| Proteomes | UP000007305 | |
| GO | GO:0009507 GO:0008703 GO:0008835 GO:0004159 GO:0016799 GO:0050661 GO:0008270 GO:1901135 GO:0009658 GO:0046443 GO:0009644 GO:0009231 | |
| Gene3D | 3.40.430.10 | |
| InterPro | IPR012816 IPR002125 IPR016193 IPR024072 IPR004794 IPR011549 IPR002734 | |
| Pfam | PF08719 PF01872 | |
| SUPFAM | SSF53597 SSF53927 | |
| TIGRFAMs | TIGR00326 TIGR00227 TIGR02464 | |
| PROSITE | PS51747 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0004159 |
dihydropyrimidine dehydrogenase (NAD+) activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Figure 3B shows that ZmPyrR complements reductase but not deaminase function of E. coli RibD. Figure 4A shows the disappearance of 5-amino-6-ribosylamino-2,4(1H,3H)-pyrimidinedione 5’-P and Figure 4B shows the appearance of 5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione 5’-P in recombinant maize PyR. E. coli RibA, demonstrating pyrimidine reductase activity in vitro. |
complete | ||||
| GO:0009507 |
chloroplast |
ECO:0000314 |
C |
Figure 6 shows radiolabeled Maize PyrR plastid localization. |
complete | |||||
|
enables |
GO:0016799 |
hydrolase activity, hydrolyzing N-glycosyl compounds |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:1901135 |
carbohydrate derivative metabolic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009507 |
chloroplast |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:1901135 |
carbohydrate derivative metabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9STY4 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0046443 |
FAD metabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9STY4 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0016799 |
hydrolase activity, hydrolyzing N-glycosyl compounds |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9STY4 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009658 |
chloroplast organization |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9STY4 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009644 |
response to high light intensity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9STY4 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0009507 |
chloroplast |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9STY4 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008703 |
5-amino-6-(5-phosphoribosylamino)uracil reductase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9STY4 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003824 |
catalytic activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008703 |
5-amino-6-(5-phosphoribosylamino)uracil reductase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008835 |
diaminohydroxyphosphoribosylaminopyrimidine deaminase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009231 |
riboflavin biosynthetic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0050661 |
NADP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0055114 |
oxidation-reduction process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008703 |
5-amino-6-(5-phosphoribosylamino)uracil reductase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008152 |
metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016798 |
hydrolase activity, acting on glycosyl bonds |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003824 |
catalytic activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0055114 |
oxidation-reduction process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016491 |
oxidoreductase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009507 |
chloroplast |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009536 |
plastid |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009231 |
riboflavin biosynthetic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
UniPathway:UPA00275 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Frelin, O et al. (2015) A directed-overflow and damage-control N-glycosidase in riboflavin biosynthesis. Biochem. J. 466 137-45 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Hasnain, G et al. (2013) Identification and characterization of the missing pyrimidine reductase in the plant riboflavin biosynthesis pathway. Plant Physiol. 161 48-56 PubMed GONUTS page
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