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MAIZE:CRS2

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Species (Taxon ID) Zea mays (Maize). (4577)
Gene Name(s) CRS2
Protein Name(s) Chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic

Chloroplastic RNA splicing factor 2 Protein CHLOROPLAST RNA SPLICING 2

External Links
UniProt Q9M5P4
EMBL AF225708
RefSeq NP_001104963.1
UniGene Zm.478
PDB 1RYB
1RYM
1RYN
PDBsum 1RYB
1RYM
1RYN
ProteinModelPortal Q9M5P4
SMR Q9M5P4
GeneID 541812
KEGG zma:541812
Gramene Q9M5P4
MaizeGDB 106358
HOGENOM HOG000004797
KO K01056
EvolutionaryTrace Q9M5P4
Proteomes UP000007305
GO GO:0009570
GO:0030529
GO:0004045
GO:0006397
GO:0008380
Gene3D 3.40.50.1470
HAMAP MF_00083
InterPro IPR001328
IPR018171
PANTHER PTHR17224
Pfam PF01195
SUPFAM SSF53178
TIGRFAMs TIGR00447
PROSITE PS01195

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0009570

chloroplast stroma

PMID:11179231[1]

ECO:0000314

C

Figure 3c: Immunoblots of chloroplast subfractions showed that CRS2 is found predominantly in the chloroplast stroma.

complete

GO:0030529

ribonucleoprotein complex

PMID:11179231[1]

ECO:0000314

C

Figure 6 a,c,d: Following sucrose gradient sedimentation of crude stroma, essentially all of the CRS2 was found in a peak that sediments more rapidly than Rubisco (550 kDa) and more slowly than ribosomes (Figure 6A, C and D). A260 profile of the +MNase gradient illustrating that ribosomes peak in fractions 18–21 (6D)

complete

enables

GO:0004045

aminoacyl-tRNA hydrolase activity

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

EcoGene:EG10785
PANTHER:PTN000425416
SGD:S000001232
UniProtKB:P9WHN7

F

Seeded From UniProt

complete

enables

GO:0004045

aminoacyl-tRNA hydrolase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001328
InterPro:IPR018171
InterPro:IPR036416

F

Seeded From UniProt

complete

involved_in

GO:0008380

RNA splicing

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0508

P

Seeded From UniProt

complete

involved_in

GO:0006397

mRNA processing

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0507

P

Seeded From UniProt

complete

part_of

GO:0009536

plastid

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0934

C

Seeded From UniProt

complete

part_of

GO:0009507

chloroplast

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0150

C

Seeded From UniProt

complete

part_of

GO:0009570

chloroplast stroma

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0055

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Jenkins, BD & Barkan, A (2001) Recruitment of a peptidyl-tRNA hydrolase as a facilitator of group II intron splicing in chloroplasts. EMBO J. 20 872-9 PubMed GONUTS page
  2. Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page