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LACLM:XERS
Contents
Species (Taxon ID) | Lactococcus lactis subsp. cremoris (strain MG1363). (416870) | |
Gene Name(s) | xerS (ECO:0000255 with HAMAP-Rule:MF_01816) | |
Protein Name(s) | Tyrosine recombinase XerS (ECO:0000255 with HAMAP-Rule:MF_01816) | |
External Links | ||
UniProt | A2RKP9 | |
EMBL | AM406671 | |
RefSeq | YP_001032577.1 | |
ProteinModelPortal | A2RKP9 | |
STRING | 416870.llmg_1270 | |
EnsemblBacteria | CAL97863 | |
GeneID | 4798583 | |
KEGG | llm:llmg_1270 | |
PATRIC | 22283709 | |
eggNOG | COG0582 | |
HOGENOM | HOG000156525 | |
OMA | LRNYDDM | |
OrthoDB | EOG6K13TC | |
BioCyc | LLAC416870:GCDT-1296-MONOMER | |
Proteomes | UP000000364 | |
GO | GO:0005737 GO:0003677 GO:0009037 GO:0007049 GO:0051301 GO:0007059 GO:0006313 | |
Gene3D | 1.10.150.130 1.10.443.10 | |
HAMAP | MF_01816 | |
InterPro | IPR011010 IPR013762 IPR002104 IPR023109 IPR004107 IPR023670 | |
Pfam | PF13495 PF00589 | |
SUPFAM | SSF56349 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0009037 |
tyrosine-based site-specific recombinase activity |
ECO:0000315 |
F |
IMP was conclude based on Figure 3, which indicates XerS/difSL Recombination in E. coli. In absence of the lactococcal XerS recombinase, almost no recombination was observed indicating that XerCD of E. coli do not recombine difSL. In contrast, introduction of a plasmid expressing the lactococcal xerS gene increased the excision frequency (observed in E. coli when using the native XerCD/dif system.) |
complete | |||||
enables |
GO:0009037 |
tyrosine-based site-specific recombinase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR002104 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007059 |
chromosome segregation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0015074 |
DNA integration |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR002104 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051301 |
cell division |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007059 |
chromosome segregation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000085064 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0009037 |
tyrosine-based site-specific recombinase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000085064 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000085064 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000085064 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051301 |
cell division |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007049 |
cell cycle |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0015074 |
DNA integration |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007059 |
chromosome segregation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Le Bourgeois, P et al. (2007) The unconventional Xer recombination machinery of Streptococci/Lactococci. PLoS Genet. 3 e117 PubMed GONUTS page