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LACLM:6PGD

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Species (Taxon ID) Lactococcus lactis subsp. cremoris (strain MG1363). (416870)
Gene Name(s) gnd
Protein Name(s) 6-phosphogluconate dehydrogenase, decarboxylating
External Links
UniProt P96789
EMBL U74322
AM406671
RefSeq YP_001031931.1
PDB 2IYO
2IYP
2IZ0
2IZ1
PDBsum 2IYO
2IYP
2IZ0
2IZ1
ProteinModelPortal P96789
SMR P96789
STRING 416870.llmg_0586
EnsemblBacteria CAL97186
GeneID 4798708
KEGG llm:llmg_0586
PATRIC 22282257
eggNOG COG0362
HOGENOM HOG000255147
KO K00033
OMA SDEYNWD
OrthoDB EOG6MSS4W
BioCyc LLAC416870:GCDT-613-MONOMER
SABIO-RK P96789
UniPathway UPA00115
EvolutionaryTrace P96789
Proteomes UP000000364
GO GO:0050661
GO:0004616
GO:0019521
GO:0006098
Gene3D 1.10.1040.10
1.20.5.320
3.40.50.720
InterPro IPR008927
IPR006114
IPR006113
IPR006115
IPR006184
IPR013328
IPR012284
IPR016040
Pfam PF00393
PF03446
PIRSF PIRSF000109
SUPFAM SSF48179
TIGRFAMs TIGR00873
PROSITE PS00461

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0006525

arginine metabolic process

PMID:9931298[1]

ECO:0000315

P

As shown on page 57, "The role of the L. lactis 6-PGDH Arg-447 in binding of substrate" paragraph of the associated PMID:"Despite the fact that the mutated [6-PGDH] enzymes were all soluble... none had any activity whatsoever... confirming that this [Arginine] residue plays a critical role in activity."

complete
CACAO 9641

enables

GO:0004616

phosphogluconate dehydrogenase (decarboxylating) activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006113
InterPro:IPR006114
InterPro:IPR006183
InterPro:IPR006184

F

Seeded From UniProt

complete

involved_in

GO:0006098

pentose-phosphate shunt

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006113
InterPro:IPR006114
InterPro:IPR006184

P

Seeded From UniProt

complete

enables

GO:0016491

oxidoreductase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013328

F

Seeded From UniProt

complete

enables

GO:0050661

NADP binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006115

F

Seeded From UniProt

complete

involved_in

GO:0055114

oxidation-reduction process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006113
InterPro:IPR006114
InterPro:IPR006183
InterPro:IPR006184
InterPro:IPR008927
InterPro:IPR013328

P

Seeded From UniProt

complete

enables

GO:0004616

phosphogluconate dehydrogenase (decarboxylating) activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:1.1.1.44

F

Seeded From UniProt

complete

involved_in

GO:0006098

pentose-phosphate shunt

GO_REF:0000037
GO_REF:0000041

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0570
UniPathway:UPA00115

P

Seeded From UniProt

complete

enables

GO:0016491

oxidoreductase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0560

F

Seeded From UniProt

complete

involved_in

GO:0055114

oxidation-reduction process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0560

P

Seeded From UniProt

complete

involved_in

GO:0019521

D-gluconate metabolic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0311

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Tetaud, E et al. (1999) 6-Phosphogluconate dehydrogenase from Lactococcus lactis: a role for arginine residues in binding substrate and coenzyme. Biochem. J. 338 ( Pt 1) 55-60 PubMed GONUTS page