GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

LABAI:4HYPE

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata). (384765)
Gene Name(s) No Information Provided.
Protein Name(s) 4-hydroxyproline 2-epimerase (ECO:0000303 with PMID:24980702[1])

4Hyp 2-epimerase 4HypE (ECO:0000303 with PMID:24980702[1])

External Links
UniProt A0NXQ7
EMBL AAUW01000014
RefSeq WP_006937102.1
ProteinModelPortal A0NXQ7
SMR A0NXQ7
STRING 384765.SIAM614_28492
EnsemblBacteria EAV42584
PATRIC 30168085
eggNOG ENOG4105CTU
COG3938
Proteomes UP000004848
GO GO:0047580
InterPro IPR008794
Pfam PF05544
PIRSF PIRSF029792

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0047580

4-hydroxyproline epimerase activity

PMID:24980702[1]

ECO:0000314

F

Table 2 contains the kinetic parameters for the reaction, the uniprot ID and the assigned function. (4R-hydroxyproline 2-epimerase is 4HypE and trans3-hydroxy-L-proline dehydratase is t3HypD)

complete
CACAO 10189

enables

GO:0047580

4-hydroxyproline epimerase activity

PMID:24980702[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0047580

4-hydroxyproline epimerase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:5.1.1.8

F

Seeded From UniProt

complete

enables

GO:0016853

isomerase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0413

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Zhao, S et al. (2014) Prediction and characterization of enzymatic activities guided by sequence similarity and genome neighborhood networks. Elife 3 PubMed GONUTS page