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HUMAN:SGCD

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Species (Taxon ID) Homo sapiens (Human). (9606)
Gene Name(s) SGCD
Protein Name(s) Delta-sarcoglycan

Delta-SG 35 kDa dystrophin-associated glycoprotein 35DAG

External Links
UniProt Q92629
EMBL X95191
U58331
AK292794
BX537948
BC020740
CCDS CCDS47325.1
CCDS47326.1
CCDS47327.1
RefSeq NP_000328.2
NP_001121681.1
NP_758447.1
XP_005266022.1
XP_005266023.1
XP_006714974.1
UniGene Hs.387207
Hs.644733
ProteinModelPortal Q92629
BioGrid 112342
IntAct Q92629
MINT MINT-119001
STRING 9606.ENSP00000338343
PhosphoSite Q92629
DMDM 212276471
MaxQB Q92629
PaxDb Q92629
PRIDE Q92629
DNASU 6444
Ensembl ENST00000337851
ENST00000435422
ENST00000517913
GeneID 6444
KEGG hsa:6444
UCSC uc003lwa.1
uc003lwc.4
uc003lwd.4
CTD 6444
GeneCards GC05P155297
GeneReviews SGCD
HGNC HGNC:10807
HPA HPA026969
MIM 601287
601411
606685
neXtProt NX_Q92629
Orphanet 219
154
PharmGKB PA35718
eggNOG NOG318936
GeneTree ENSGT00390000017950
HOGENOM HOG000007853
HOVERGEN HBG008669
InParanoid Q92629
KO K12563
OMA IRSRPGN
OrthoDB EOG7SN8DC
PhylomeDB Q92629
TreeFam TF313538
ChiTaRS SGCD
GeneWiki Delta-sarcoglycan
SGCD
GenomeRNAi 6444
NextBio 25043
PRO PR:Q92629
Proteomes UP000005640
Bgee Q92629
CleanEx HS_SGCD
ExpressionAtlas Q92629
Genevestigator Q92629
GO GO:0005737
GO:0005856
GO:0016010
GO:0016021
GO:0005886
GO:0016012
GO:0042383
GO:0007517
InterPro IPR006875
IPR027661
PANTHER PTHR12939:SF6
Pfam PF04790

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0016010

dystrophin-associated glycoprotein complex

PMID:17993586[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0060047

heart contraction

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0025391
PANTHER:PTN000986439

P

Seeded From UniProt

complete

involved_in

GO:0048738

cardiac muscle tissue development

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000986439
ZFIN:ZDB-GENE-030131-3684

P

Seeded From UniProt

complete

part_of

GO:0042383

sarcolemma

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1346524
MGI:MGI:1346525
PANTHER:PTN000986439

C

Seeded From UniProt

complete

part_of

GO:0016012

sarcoglycan complex

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1346524
MGI:MGI:1346525
MGI:MGI:2388820
PANTHER:PTN000986439

C

Seeded From UniProt

complete

involved_in

GO:0086003

cardiac muscle cell contraction

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P82347
ensembl:ENSMUSP00000076459

P

Seeded From UniProt

complete

involved_in

GO:0060977

coronary vasculature morphogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P82347
ensembl:ENSMUSP00000076459

P

Seeded From UniProt

complete

involved_in

GO:0060048

cardiac muscle contraction

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P82347
ensembl:ENSMUSP00000076459

P

Seeded From UniProt

complete

involved_in

GO:0055074

calcium ion homeostasis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P82347
ensembl:ENSMUSP00000076459

P

Seeded From UniProt

complete

involved_in

GO:0048739

cardiac muscle fiber development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P82347
ensembl:ENSMUSP00000076459

P

Seeded From UniProt

complete

part_of

GO:0042383

sarcolemma

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P82347
ensembl:ENSMUSP00000076459

C

Seeded From UniProt

complete

involved_in

GO:0034629

cellular protein-containing complex localization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P82347
ensembl:ENSMUSP00000076459

P

Seeded From UniProt

complete

involved_in

GO:0019722

calcium-mediated signaling

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P82347
ensembl:ENSMUSP00000076459

P

Seeded From UniProt

complete

part_of

GO:0016529

sarcoplasmic reticulum

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P82347
ensembl:ENSMUSP00000076459

C

Seeded From UniProt

complete

part_of

GO:0016012

sarcoglycan complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P82347
ensembl:ENSMUSP00000076459

C

Seeded From UniProt

complete

part_of

GO:0016011

dystroglycan complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P82347
ensembl:ENSMUSP00000076459

C

Seeded From UniProt

complete

involved_in

GO:0008219

cell death

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P82347
ensembl:ENSMUSP00000076459

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P82347
ensembl:ENSMUSP00000076459

C

Seeded From UniProt

complete

involved_in

GO:0003015

heart process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P82347
ensembl:ENSMUSP00000076459

P

Seeded From UniProt

complete

part_of

GO:0016012

sarcoglycan complex

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006875
InterPro:IPR027661
InterPro:IPR039972

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006875
InterPro:IPR027661
InterPro:IPR039972

C

Seeded From UniProt

complete

part_of

GO:0016012

sarcoglycan complex

PMID:8841194[3]

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0007517

muscle organ development

PMID:8842738[4]
PMID:8841194[3]

ECO:0000304

author statement supported by traceable reference used in manual assertion


P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:8842738[4]

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1003

C

Seeded From UniProt

complete

part_of

GO:0005856

cytoskeleton

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0206
UniProtKB-SubCell:SL-0090

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

part_of

GO:0042383

sarcolemma

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0238

C

Seeded From UniProt

complete

edit table

Notes

References

See Help:References for how to manage references in GONUTS.

  1. ↑ Sharma, P et al. (2008) Expression of the dystrophin-glycoprotein complex is a marker for human airway smooth muscle phenotype maturation. Am. J. Physiol. Lung Cell Mol. Physiol. 294 L57-68 PubMed GONUTS page
  2. ↑ 2.0 2.1 2.2 2.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  3. ↑ 3.0 3.1 Nigro, V et al. (1996) Autosomal recessive limb-girdle muscular dystrophy, LGMD2F, is caused by a mutation in the delta-sarcoglycan gene. Nat. Genet. 14 195-8 PubMed GONUTS page
  4. ↑ 4.0 4.1 Nigro, V et al. (1996) Identification of a novel sarcoglycan gene at 5q33 encoding a sarcolemmal 35 kDa glycoprotein. Hum. Mol. Genet. 5 1179-86 PubMed GONUTS page
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