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HUMAN:SEM6D

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Species (Taxon ID) Homo sapiens (Human). (9606)
Gene Name(s) SEMA6D (synonyms: KIAA1479)
Protein Name(s) Semaphorin-6D
External Links
UniProt Q8NFY4
EMBL AF389426
AF389427
AF389428
AF389429
AF389430
AB040912
AC018900
AC044787
AC009558
AC012050
AC023905
AC066615
AC084882
BC150253
CCDS CCDS32224.1
CCDS32225.1
CCDS32226.1
CCDS32227.1
CCDS32228.1
CCDS32229.1
RefSeq NP_001185928.1
NP_065909.1
NP_079242.2
NP_705869.1
NP_705870.1
NP_705871.1
NP_705872.1
XP_005254744.1
XP_005254746.1
XP_011520379.1
XP_011520380.1
XP_011520381.1
XP_011520382.1
XP_011520383.1
XP_016878108.1
XP_016878109.1
XP_016878110.1
UniGene Hs.511265
ProteinModelPortal Q8NFY4
SMR Q8NFY4
BioGrid 123081
STRING 9606.ENSP00000324857
iPTMnet Q8NFY4
PhosphoSitePlus Q8NFY4
BioMuta SEMA6D
DMDM 74715611
MaxQB Q8NFY4
PaxDb Q8NFY4
PeptideAtlas Q8NFY4
PRIDE Q8NFY4
Ensembl ENST00000316364
ENST00000354744
ENST00000355997
ENST00000358066
ENST00000389425
ENST00000389428
ENST00000536845
ENST00000558014
ENST00000558816
GeneID 80031
KEGG hsa:80031
UCSC uc001zvw.4
CTD 80031
DisGeNET 80031
GeneCards SEMA6D
HGNC HGNC:16770
HPA HPA043109
MIM 609295
neXtProt NX_Q8NFY4
OpenTargets ENSG00000137872
PharmGKB PA134951035
eggNOG KOG3611
ENOG410XQZC
GeneTree ENSGT00760000119134
HOGENOM HOG000232047
HOVERGEN HBG072910
InParanoid Q8NFY4
KO K06842
OMA YIAGRDQ
OrthoDB EOG091G014B
PhylomeDB Q8NFY4
TreeFam TF316102
Reactome [www.reactome.org/content/detail/R-HSA-416700 R-HSA-416700]
ChiTaRS SEMA6D
GenomeRNAi 80031
PRO PR:Q8NFY4
Proteomes UP000005640
Bgee ENSG00000137872
ExpressionAtlas Q8NFY4
Genevisible Q8NFY4
GO GO:0005794
GO:0016021
GO:0005886
GO:0030154
GO:0014912
GO:0014911
GO:0021591
Gene3D 2.130.10.10
InterPro IPR002165
IPR016201
IPR001627
IPR027231
IPR015943
PANTHER PTHR11036
Pfam PF01437
PF01403
SMART SM00423
SM00630
SUPFAM SSF101912
PROSITE PS51004

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0071526

semaphorin-plexin signaling pathway

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:107556
MGI:MGI:107557
MGI:MGI:107558
MGI:MGI:107560
MGI:MGI:109252
MGI:MGI:1203727
MGI:MGI:1340034
PANTHER:PTN000867340
UniProtKB:Q92854

P

Seeded From UniProt

complete

involved_in

GO:0050919

negative chemotaxis

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:107558
MGI:MGI:1096347
PANTHER:PTN000744245

P

Seeded From UniProt

complete

involved_in

GO:0048843

negative regulation of axon extension involved in axon guidance

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:107558
MGI:MGI:1096347
PANTHER:PTN000867340
RGD:1308650

P

Seeded From UniProt

complete

enables

GO:0045499

chemorepellent activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:107558
MGI:MGI:1096347
PANTHER:PTN000867340
UniProtKB:Q13275

F

Seeded From UniProt

complete

enables

GO:0038191

neuropilin binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:107558
PANTHER:PTN000867406
UniProtKB:A0A1D5PZ68
UniProtKB:O42236
UniProtKB:O42237
UniProtKB:Q90607
UniProtKB:Q90663

F

Seeded From UniProt

complete

involved_in

GO:0030335

positive regulation of cell migration

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:109244
PANTHER:PTN000867340
UniProtKB:Q92854

P

Seeded From UniProt

complete

enables

GO:0030215

semaphorin receptor binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:107556
MGI:MGI:107557
MGI:MGI:107558
MGI:MGI:109244
MGI:MGI:1202889
MGI:MGI:1203727
MGI:MGI:1338032
MGI:MGI:1340034
MGI:MGI:2387661
PANTHER:PTN000867340
UniProtKB:Q92854
WB:WBGene00003111
WB:WBGene00004889

F

Seeded From UniProt

complete

part_of

GO:0005887

integral component of plasma membrane

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1203727
PANTHER:PTN000112372
UniProtKB:Q92854

C

Seeded From UniProt

complete

part_of

GO:0005615

extracellular space

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:107557
MGI:MGI:109244
PANTHER:PTN000744245
UniProtKB:A0A1D5PZ68
UniProtKB:O42236
UniProtKB:O42237
UniProtKB:Q90607
UniProtKB:Q90663

C

Seeded From UniProt

complete

involved_in

GO:0001755

neural crest cell migration

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:107557
MGI:MGI:1096347
PANTHER:PTN000867340
ZFIN:ZDB-GENE-050513-4

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000052

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005794

Golgi apparatus

GO_REF:0000052

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0030215

semaphorin receptor binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q76KF0
ensembl:ENSMUSP00000099529

F

Seeded From UniProt

complete

involved_in

GO:0021591

ventricular system development

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q76KF0
ensembl:ENSMUSP00000099529

P

Seeded From UniProt

complete

involved_in

GO:0014912

negative regulation of smooth muscle cell migration

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q76KF0
ensembl:ENSMUSP00000099529

P

Seeded From UniProt

complete

involved_in

GO:0014911

positive regulation of smooth muscle cell migration

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q76KF0
ensembl:ENSMUSP00000099529

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:12110693[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0009986

cell surface

PMID:12110693[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0030517

negative regulation of axon extension

PMID:12110693[2]

ECO:0000314

direct assay evidence used in manual assertion

P

  • regulates_o_occurs_in:(CL:0002608)
  • happens_during:(UBERON:0009953)|regulates_o_occurs_in(UBERON:0000044)
  • happens_during:(UBERON:0000068)

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:12110693[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

Reactome:R-HSA-416725

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0007275

multicellular organism development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0217

P

Seeded From UniProt

complete

involved_in

GO:0030154

cell differentiation

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0221

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

involved_in

GO:0007399

nervous system development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0524

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1003
UniProtKB-SubCell:SL-0039

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

edit table

Notes

References

See Help:References for how to manage references in GONUTS.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  2. ↑ 2.0 2.1 2.2 2.3 Qu, X et al. (2002) Identification, characterization, and functional study of the two novel human members of the semaphorin gene family. J. Biol. Chem. 277 35574-85 PubMed GONUTS page
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