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HUMAN:CXB2
Contents
Species (Taxon ID) | Homo sapiens (Human). (9606) | |
Gene Name(s) | GJB2 | |
Protein Name(s) | Gap junction beta-2 protein
Connexin-26 Cx26 | |
External Links | ||
UniProt | P29033 | |
EMBL | M86849 AF281280 AF479776 AY255853 AY275646 AY275647 AY275648 AY275649 AY275650 AY275651 AY275652 AY275653 AY275654 AY280971 AY953438 AY953441 BT006732 AL138688 BC017048 BC071703 | |
CCDS | CCDS9290.1 | |
PIR | A43424 | |
RefSeq | NP_003995.2 XP_005266411.1 XP_005266412.1 XP_005266413.1 | |
UniGene | Hs.524894 Hs.714494 | |
PDB | 1XIR 2ZW3 3IZ1 3IZ2 | |
PDBsum | 1XIR 2ZW3 3IZ1 3IZ2 | |
ProteinModelPortal | P29033 | |
SMR | P29033 | |
BioGrid | 108972 | |
DIP | DIP-59742N | |
IntAct | P29033 | |
GuidetoPHARMACOLOGY | 716 | |
TCDB | 1.A.24.1.3 | |
PhosphoSite | P29033 | |
DMDM | 77416855 | |
PaxDb | P29033 | |
PRIDE | P29033 | |
DNASU | 2706 | |
Ensembl | ENST00000382844 ENST00000382848 | |
GeneID | 2706 | |
KEGG | hsa:2706 | |
UCSC | uc001umy.3 | |
CTD | 2706 | |
GeneCards | GC13M020761 | |
GeneReviews | GJB2 | |
HGNC | HGNC:4284 | |
HPA | CAB013093 | |
MIM | 121011 124500 148210 148350 149200 220290 601544 602540 | |
neXtProt | NX_P29033 | |
Orphanet | 90635 90636 330029 494 477 2698 2202 166286 | |
PharmGKB | PA28695 | |
eggNOG | NOG39645 | |
GeneTree | ENSGT00760000118780 | |
HOVERGEN | HBG009576 | |
InParanoid | P29033 | |
KO | K07621 | |
OMA | MYVFYIM | |
OrthoDB | EOG7P2XSS | |
PhylomeDB | P29033 | |
TreeFam | TF329606 | |
Reactome | REACT_11050 REACT_9392 REACT_9398 REACT_9509 | |
EvolutionaryTrace | P29033 | |
GeneWiki | GJB2 | |
GenomeRNAi | 2706 | |
NextBio | 10698 | |
PRO | PR:P29033 | |
Proteomes | UP000005640 | |
Bgee | P29033 | |
ExpressionAtlas | P29033 | |
Genevestigator | P29033 | |
GO | GO:0005922 GO:0005793 GO:0016021 GO:0016328 GO:0005886 GO:0005243 GO:0007267 GO:0034599 GO:0046697 GO:0016264 GO:0030539 GO:0061024 GO:0032355 GO:0044752 GO:0032570 GO:0007605 GO:0006810 | |
InterPro | IPR000500 IPR002268 IPR019570 IPR017990 IPR013092 | |
PANTHER | PTHR11984 | |
Pfam | PF00029 PF10582 | |
PRINTS | PR00206 PR01139 | |
SMART | SM00037 SM01089 | |
PROSITE | PS00407 PS00408 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0005243 |
gap junction channel activity |
ECO:0000315 |
F |
Figure 1 shows a much higher concentration of ions in components of the inner human ear for the mutant phenotype. However, in the wild type, with the functional Cx26, you see a much smaller ion concentration, indicating gap junction channel activity. |
complete | |||||
enables |
GO:0005509 |
calcium ion binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005922 |
connexin complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:1990349 |
gap junction-mediated intercellular transport |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0005243 |
gap junction channel activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005887 |
integral component of plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007267 |
cell-cell signaling |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0055085 |
transmembrane transport |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0005243 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0055085 |
transmembrane transport |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0005243 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0055085 |
transmembrane transport |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0005243 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:1905867 |
epididymis development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0097449 |
astrocyte projection |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071549 |
cellular response to dexamethasone stimulus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071377 |
cellular response to glucagon stimulus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048839 |
inner ear development |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0046697 |
decidualization |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0046677 |
response to antibiotic |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0044752 |
response to human chorionic gonadotropin |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0044297 |
cell body |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0034599 |
cellular response to oxidative stress |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032570 |
response to progesterone |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032526 |
response to retinoic acid |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032496 |
response to lipopolysaccharide |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032355 |
response to estradiol |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0030054 |
cell junction |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0016328 |
lateral plasma membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007568 |
aging |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007565 |
female pregnancy |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005921 |
gap junction |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005829 |
cytosol |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0005243 |
gap junction channel activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0002931 |
response to ischemia |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P21994 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:1990349 |
gap junction-mediated intercellular transport |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q00977 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016264 |
gap junction assembly |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q00977 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007267 |
cell-cell signaling |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q00977 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005922 |
connexin complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q00977 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005921 |
gap junction |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q00977 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005887 |
integral component of plasma membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q00977 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0005243 |
gap junction channel activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q00977 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005922 |
connexin complex |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007154 |
cell communication |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016264 |
gap junction assembly |
Reactome:R-HSA-190861 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
Reactome:R-HSA-451056 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005793 |
endoplasmic reticulum-Golgi intermediate compartment |
Reactome:R-HSA-451056 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007605 |
sensory perception of sound |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0030054 |
cell junction |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005921 |
gap junction |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Zonta, F et al. (2014) Molecular dynamics simulations highlight structural and functional alterations in deafness-related M34T mutation of connexin 26. Front Physiol 5 85 PubMed GONUTS page
- ↑ Bennett, BC et al. (2016) An electrostatic mechanism for Ca(2+)-mediated regulation of gap junction channels. Nat Commun 7 8770 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 Oshima, A et al. (2011) Asymmetric configurations and N-terminal rearrangements in connexin26 gap junction channels. J. Mol. Biol. 405 724-35 PubMed GONUTS page
- ↑ Maeda, S et al. (2009) Structure of the connexin 26 gap junction channel at 3.5 A resolution. Nature 458 597-602 PubMed GONUTS page
- ↑ Oshima, A et al. (2007) Three-dimensional structure of a human connexin26 gap junction channel reveals a plug in the vestibule. Proc. Natl. Acad. Sci. U.S.A. 104 10034-9 PubMed GONUTS page
c
- GO:0005509 ! calcium ion binding
- Catarrhini
- GO:0007267 ! cell-cell signaling
- GO:0034599 ! cellular response to oxidative stress
- GO:0071549 ! cellular response to dexamethasone stimulus
- GO:0071377 ! cellular response to glucagon stimulus
- GO:0044297 ! cell body
- GO:0007154 ! cell communication
- GO:0030054 ! cell junction
- Chordata
- GO:0005922 ! connexin complex
- Craniata
- GO:0005737 ! cytoplasm
- GO:0005829 ! cytosol
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