GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
HUMAN:ATX10
Contents
| Species (Taxon ID) | Homo sapiens (Human). (9606) | |
| Gene Name(s) | ATXN10 (synonyms: SCA10) | |
| Protein Name(s) | Ataxin-10
Brain protein E46 homolog Spinocerebellar ataxia type 10 protein | |
| External Links | ||
| UniProt | Q9UBB4 | |
| EMBL | AL050282 AF119662 CR457381 CR456568 AK294348 Z84478 Z93784 Z95331 Z93784 Z84478 Z95331 Z95331 Z84478 Z93784 BC007508 | |
| CCDS | CCDS14070.1 CCDS54540.1 | |
| PIR | T08753 | |
| RefSeq | NP_001161093.1 NP_037368.1 | |
| UniGene | Hs.475125 | |
| ProteinModelPortal | Q9UBB4 | |
| SMR | Q9UBB4 | |
| BioGrid | 117343 | |
| IntAct | Q9UBB4 | |
| MINT | MINT-5006669 | |
| STRING | 9606.ENSP00000252934 | |
| PhosphoSite | Q9UBB4 | |
| DMDM | 17372671 | |
| MaxQB | Q9UBB4 | |
| PaxDb | Q9UBB4 | |
| PeptideAtlas | Q9UBB4 | |
| PRIDE | Q9UBB4 | |
| DNASU | 25814 | |
| Ensembl | ENST00000252934 ENST00000381061 | |
| GeneID | 25814 | |
| KEGG | hsa:25814 | |
| UCSC | uc003bgm.2 uc011aqt.2 | |
| CTD | 25814 | |
| GeneCards | GC22P046067 | |
| GeneReviews | ATXN10 | |
| HGNC | HGNC:10549 | |
| HPA | HPA049531 | |
| MIM | 603516 611150 | |
| neXtProt | NX_Q9UBB4 | |
| Orphanet | 98761 | |
| PharmGKB | PA34959 | |
| eggNOG | NOG330117 | |
| GeneTree | ENSGT00390000010377 | |
| HOGENOM | HOG000034224 | |
| HOVERGEN | HBG050622 | |
| InParanoid | Q9UBB4 | |
| OMA | NNQERVT | |
| OrthoDB | EOG7WHH9W | |
| PhylomeDB | Q9UBB4 | |
| TreeFam | TF323870 | |
| ChiTaRS | ATXN10 | |
| GeneWiki | ATXN10 | |
| GenomeRNAi | 25814 | |
| NextBio | 47043 | |
| PRO | PR:Q9UBB4 | |
| Proteomes | UP000005640 | |
| Bgee | Q9UBB4 | |
| CleanEx | HS_ATXN10 | |
| ExpressionAtlas | Q9UBB4 | |
| Genevestigator | Q9UBB4 | |
| GO | GO:0005737 GO:0005829 GO:0030425 GO:0005615 GO:0016020 GO:0043025 GO:0048471 GO:0005886 GO:0007399 GO:0031175 | |
| Gene3D | 1.25.10.10 | |
| InterPro | IPR011989 IPR016024 IPR019156 | |
| Pfam | PF09759 | |
| SUPFAM | SSF48371 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
part_of |
GO:0016020 |
membrane |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005615 |
extracellular space |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0001827) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0043025 |
neuronal cell body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0031175 |
neuron projection development |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0030425 |
dendrite |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0007399 |
nervous system development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0060271 |
cilium assembly |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P28658 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0070207 |
protein homotrimerization |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9ER24 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0042802 |
identical protein binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9ER24 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0019899 |
enzyme binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9ER24 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9ER24 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9ER24 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Ghosh, D et al. (2010) Defining the membrane proteome of NK cells. J Mass Spectrom 45 1-25 PubMed GONUTS page
- ↑ Pieragostino, D et al. (2013) Shotgun proteomics reveals specific modulated protein patterns in tears of patients with primary open angle glaucoma naïve to therapy. Mol Biosyst 9 1108-16 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 März, P et al. (2004) Ataxin-10, the spinocerebellar ataxia type 10 neurodegenerative disorder protein, is essential for survival of cerebellar neurons. J. Biol. Chem. 279 35542-50 PubMed GONUTS page
- ↑ 4.0 4.1 Waragai, M et al. (2006) Ataxin 10 induces neuritogenesis via interaction with G-protein beta2 subunit. J. Neurosci. Res. 83 1170-8 PubMed GONUTS page
- ↑ Matsuura, T et al. (2006) Interruptions in the expanded ATTCT repeat of spinocerebellar ataxia type 10: repeat purity as a disease modifier? Am. J. Hum. Genet. 78 125-9 PubMed GONUTS page
c
e
n
p
