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HELPY:RECA
Contents
| Species (Taxon ID) | Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacterpylori). (85962) | |
| Gene Name(s) | recA (ECO:0000255 with HAMAP-Rule:MF_00268) | |
| Protein Name(s) | Protein RecA (ECO:0000255 with HAMAP-Rule:MF_00268)
Recombinase A (ECO:0000255 with HAMAP-Rule:MF_00268) | |
| External Links | ||
| UniProt | P42445 | |
| EMBL | Z35478 U13756 AE000511 | |
| PIR | S58683 | |
| RefSeq | NP_206952.1 YP_006934077.1 | |
| ProteinModelPortal | P42445 | |
| SMR | P42445 | |
| STRING | 85962.HP0153 | |
| PRIDE | P42445 | |
| EnsemblBacteria | AAD07218 | |
| GeneID | 13869333 898827 | |
| KEGG | heo:C694_00765 hpy:HP0153 | |
| PATRIC | 20591527 | |
| eggNOG | COG0468 | |
| KO | K03553 | |
| OMA | TRKGAWY | |
| OrthoDB | EOG6ZKXNZ | |
| BioCyc | HPY:HP0153-MONOMER | |
| Proteomes | UP000000429 | |
| GO | GO:0005737 GO:0005524 GO:0003684 GO:0008094 GO:0003697 GO:0006310 GO:0006281 GO:0009432 | |
| Gene3D | 3.30.250.10 3.40.50.300 | |
| HAMAP | MF_00268 | |
| InterPro | IPR003593 IPR013765 IPR020584 IPR027417 IPR020588 IPR023400 IPR020587 | |
| PANTHER | PTHR22942:SF1 | |
| Pfam | PF00154 | |
| PRINTS | PR00142 | |
| SMART | SM00382 | |
| SUPFAM | SSF52540 SSF54752 | |
| TIGRFAMs | TIGR02012 | |
| PROSITE | PS00321 PS50162 PS50163 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0006281 |
DNA repair |
ECO:0000315 |
P |
Table 3, Figure 3 shows results suggest that an additional RecA-dependent pathway operates in H. pylori to repair damage induced by UV. |
complete | |||||
|
involved_in |
GO:0006281 |
DNA repair |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000534715 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003697 |
single-stranded DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR013765 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006259 |
DNA metabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006281 |
DNA repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0008094 |
DNA-dependent ATPase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003684 |
damaged DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000083075 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003697 |
single-stranded DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000083075 |
F |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000083075 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006281 |
DNA repair |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000083075 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000083075 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000083075 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0008094 |
DNA-dependent ATPase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000083075 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000083075 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0009432 |
SOS response |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000083075 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0009432 |
SOS response |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006281 |
DNA repair |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Amundsen, SK et al. (2008) Helicobacter pylori AddAB helicase-nuclease and RecA promote recombination-related DNA repair and survival during stomach colonization. Mol. Microbiol. 69 994-1007 PubMed GONUTS page
- ↑ Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
