GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

HELPY:O25949

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacterpylori). (85962)
Gene Name(s) No Information Provided.
Protein Name(s) Arginase (ECO:0000256 with RuleBase:RU361159)
External Links
UniProt O25949
EMBL AE000511
CP003904
PIR G64694
RefSeq NP_208190.1
YP_006935324.1
PDB 4G3H
PDBsum 4G3H
DIP DIP-3188N
IntAct O25949
MINT MINT-178538
STRING 85962.HP1399
EnsemblBacteria AAD08436
AFV42621
GeneID 13870611
899897
KEGG heo:C694_07230
hpy:HP1399
PATRIC 20594187
KO K01476
OMA STGVREN
OrthoDB EOG6BKJ5H
BioCyc HPY:HP1399-MONOMER
Proteomes UP000000429
UP000010112
GO GO:0004053
GO:0046872
GO:0006525
Gene3D 3.40.800.10
InterPro IPR014033
IPR006035
IPR023696
PANTHER PTHR11358
Pfam PF00491
TIGRFAMs TIGR01229
PROSITE PS51409

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0004053

arginase activity

PMID:22028830[1]

ECO:0000314

F

Figure 2 shows the metal ion and pH preference for the H. pylori gene apo-RocF. Purified apo-RocF was measured in the presence of different divalent metal ions at pH 3.0, 6.0, and 9.0. Apo-RocF has the most arginase activity with the following metal ions: Co2+ > Ni2+ > Mn2+. The optimal arginase activity occurs at pH 6.0 and half that at pH 9.0. There is no apo-RocF arginase activity at pH 3.0.

complete

enables

GO:0030145

manganese ion binding

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000144386
RGD:2150
SGD:S000006032

F

Seeded From UniProt

complete

involved_in

GO:0019547

arginine catabolic process to ornithine

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000144386
PomBase:SPAC3H1.07
PomBase:SPBP26C9.02c
RGD:2150
RGD:2151
SGD:S000006032

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:21873635[2]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000144386
RGD:2150

C

Seeded From UniProt

complete

enables

GO:0004053

arginase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR014033

F

Seeded From UniProt

complete

involved_in

GO:0006525

arginine metabolic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR014033

P

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR006035
InterPro:IPR014033

F

Seeded From UniProt

complete

enables

GO:0004053

arginase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:3.5.3.1

F

Seeded From UniProt

complete

involved_in

GO:0006525

arginine metabolic process

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0056

P

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0378

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Zhang, J et al. (2011) Expression, purification and characterization of arginase from Helicobacter pylori in its apo form. PLoS ONE 6 e26205 PubMed GONUTS page
  2. 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page