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GEOMG:Q39Q67
Contents
Species (Taxon ID) | Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210). (269799) | |
Gene Name(s) | gabD (ECO:0000313 with EMBL:ABB33607.2) | |
Protein Name(s) | 4-oxobutanoate dehydrogenase (ECO:0000313 with EMBL:ABB33607.2) | |
External Links | ||
UniProt | Q39Q67 | |
EMBL | CP000148 | |
RefSeq | WP_004512621.1 | |
ProteinModelPortal | Q39Q67 | |
STRING | 269799.Gmet_3395 | |
EnsemblBacteria | ABB33607 | |
KEGG | gme:Gmet_3395 | |
eggNOG | ENOG4105C26 COG1012 | |
HOGENOM | HOG000271509 | |
KO | K00135 | |
OMA | NSFVEWF | |
OrthoDB | 384611at2 | |
Proteomes | UP000007073 | |
GO | GO:0009013 GO:0009450 | |
Gene3D | 3.40.309.10 3.40.605.10 | |
InterPro | IPR016161 IPR016163 IPR016160 IPR029510 IPR016162 IPR015590 IPR010102 | |
Pfam | PF00171 | |
SUPFAM | SSF53720 | |
TIGRFAMs | TIGR01780 | |
PROSITE | PS00070 PS00687 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0009013 |
succinate-semialdehyde dehydrogenase [NAD(P)+] activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Figure 3 shows the succinic semialdehyde reducing ability to reducing SSA and demonstrated that NADPH/NADP+ is the suitable co-factor for these enzymes. |
complete | ||||
GO:0009013 |
succinate-semialdehyde dehydrogenase [NAD(P)+] activity |
ECO:0000247 |
sequence alignment evidence used in manual assertion |
|
F |
Table 4 shows the similarities in sequence between the SSAR proteins from Geobacter sulfurreducens and Geobacter metallireducens as compared to Arabidopsis thaliana, showing 64% sequence similarity |
complete | |||
enables |
GO:0009013 |
succinate-semialdehyde dehydrogenase [NAD(P)+] activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0009450 |
gamma-aminobutyric acid catabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016491 |
oxidoreductase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR015590 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0016620 |
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0055114 |
oxidation-reduction process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR010102 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0055114 |
oxidation-reduction process |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016491 |
oxidoreductase activity |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Zhang, Y et al. (2011) Identification of succinic semialdehyde reductases from Geobacter: expression, purification, crystallization, preliminary functional, and crystallographic analysis. Acta Biochim. Biophys. Sin. (Shanghai) 43 996-1002 PubMed GONUTS page
- ↑ Gouet, P et al. (1999) ESPript: analysis of multiple sequence alignments in PostScript. Bioinformatics 15 305-8 PubMed GONUTS page
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