GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

ECOSM:B1LQ78

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Escherichia coli (strain SMS-3-5 / SECEC). (439855)
Gene Name(s) No Information Provided.
Protein Name(s) CRISPR-associated endonuclease Cas1 (ECO:0000256 with HAMAP-Rule:MF_01470)
External Links
UniProt B1LQ78
EMBL CP000970
RefSeq WP_000144879.1
YP_001744907.1
ProteinModelPortal B1LQ78
STRING 439855.EcSMS35_2883
EnsemblBacteria ACB17726
GeneID 6143521
KEGG ecm:EcSMS35_2883
PATRIC 18434682
eggNOG COG1518
HOGENOM HOG000015862
KO K15342
OMA FIHTGKP
OrthoDB EOG60PHDG
BioCyc ECOL439855:GHHB-2879-MONOMER
Proteomes UP000007011
GO GO:0003677
GO:0004519
GO:0046872
GO:0051607
GO:0043571
HAMAP MF_01470
InterPro IPR002729
IPR019851
Pfam PF01867
TIGRFAMs TIGR00287
TIGR03638

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0090305

nucleic acid phosphodiester bond hydrolysis

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0004519

P

Seeded From UniProt

complete

involved_in

GO:0090305

nucleic acid phosphodiester bond hydrolysis

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0004519

P

Seeded From UniProt

complete

involved_in

GO:0090305

nucleic acid phosphodiester bond hydrolysis

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0004519

P

Seeded From UniProt

complete

involved_in

GO:0090305

nucleic acid phosphodiester bond hydrolysis

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0004518

P

Seeded From UniProt

complete

enables

GO:0003676

nucleic acid binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002729
InterPro:IPR033641

F

Seeded From UniProt

complete

enables

GO:0004519

endonuclease activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002729
InterPro:IPR033641

F

Seeded From UniProt

complete

enables

GO:0004520

endodeoxyribonuclease activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR019851

F

Seeded From UniProt

complete

involved_in

GO:0043571

maintenance of CRISPR repeat elements

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002729
InterPro:IPR019851
InterPro:IPR033641

P

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002729
InterPro:IPR019851
InterPro:IPR033641

F

Seeded From UniProt

complete

involved_in

GO:0051607

defense response to virus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002729
InterPro:IPR033641

P

Seeded From UniProt

complete

enables

GO:0004518

nuclease activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0540

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

enables

GO:0004519

endonuclease activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0255

F

Seeded From UniProt

complete

involved_in

GO:0051607

defense response to virus

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0051

P

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0378

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

enables

GO:0004519

endonuclease activity

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000078402

F

Seeded From UniProt

complete

involved_in

GO:0051607

defense response to virus

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000078402

P

Seeded From UniProt

complete

involved_in

GO:0043571

maintenance of CRISPR repeat elements

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000078402

P

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000078402

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.