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ECOLX:TRAM2

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Species (Taxon ID) Escherichia coli. (562)
Gene Name(s) traM
Protein Name(s) Relaxosome protein TraM
External Links
UniProt P07294
EMBL M19710
PIR A23956
RefSeq YP_003108299.1
YP_003829131.1
YP_003829256.1
YP_008766624.1
PDB 1DP3
PDBsum 1DP3
ProteinModelPortal P07294
SMR P07294
DIP DIP-27656N
PRIDE P07294
GeneID 17500340
8319229
9538058
9538189
OMA YHEMISK
EvolutionaryTrace P07294
GO GO:0005737
GO:0003677
GO:0000746
GO:0006355
GO:0006351
InterPro IPR010992
IPR007925
Pfam PF05261
ProDom PD008204
SUPFAM SSF47729

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0032508

DNA duplex unwinding

PMID:19767439[1]

ECO:0000314

P

See Fig 6

complete

involved_in

GO:0000746

conjugation

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR007925

P

Seeded From UniProt

complete

GO:0032079

positive regulation of endodeoxyribonuclease activity

PMID:17238924[2]

ECO:0000314

P

See Fig 3. Addition of purified traM stimulates the nicking reaction up to approximately fourfold

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR007925
InterPro:IPR010992

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

involved_in

GO:0000746

conjugation

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0184

P

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Sut, MV et al. (2009) Protein and DNA effectors control the TraI conjugative helicase of plasmid R1. J. Bacteriol. 191 6888-99 PubMed GONUTS page
  2. Ragonese, H et al. (2007) The F plasmid-encoded TraM protein stimulates relaxosome-mediated cleavage at oriT through an interaction with TraI. Mol. Microbiol. 63 1173-84 PubMed GONUTS page