GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

ECOLX:E2D2R3

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Escherichia coli. (562)
Gene Name(s) dkgA (ECO:0000313 with EMBL:ADK47405.1)
Protein Name(s) 2,5-didehydrogluconate reductase (ECO:0000313 with EMBL:CDP73911.1)

2,5-diketo-D-gluconate reductase [multifunctional] (ECO:0000313 with EMBL:CDY61558.1) 2,5-diketo-D-gluconic acid reductase (ECO:0000313 with EMBL:AHM29898.1) 2,5-diketo-D-gluconic acid reductase A (ECO:0000313 with EMBL:CEE06113.1) DkgA (ECO:0000313 with EMBL:ADK47405.1)

External Links
UniProt E2D2R3
EMBL GQ478251
CP007265
CP007390
CP007391
CP007392
CP007393
CP007394
CCCP010000038
HG976963
LM993812
LM995446
CCNI01000039
JFFO01000067
JFFN01000072
JFFJ01000048
JHEW01000032
JHEZ01000023
JNBX01000087
JMIZ01000006
JMJD01000003
JMJE01000013
JEND02000001
JENE03000001
JNNL01000017
JNNJ01000040
JNNK01000008
JNNI01000006
JRBB01000057
JPKJ01000005
JPKH01000003
JPKK01000005
JPKL01000009
JPMZ01000002
SMR E2D2R3
PRIDE E2D2R3
EnsemblBacteria AHM29898
GO GO:0050580
Gene3D 3.20.20.100
InterPro IPR001395
IPR018170
IPR020471
IPR023210
PANTHER PTHR11732
Pfam PF00248
PIRSF PIRSF000097
PRINTS PR00069
SUPFAM SSF51430
PROSITE PS00798
PS00062
PS00063

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0050580

2,5-didehydrogluconate reductase activity

PMID:19429550[1]

ECO:0000316

UniProtKB:E2D2R2


F

Figure 5: when expressed from plasmids, dkgA was found to decrease furfural tolerance. Figure 6: Deletions of dkgA caused an increase in furfural tolerance and a decrease in furfural reductase activity in vivo similar to the results shown in the EMFR9 strain of E. coli. Since deletion of dkgA alone did not lower the in vivo reductase activity or increase furfural tolerance, another gene, yqhD, is presumed to be the more important activity for growth inhibition by low concentrations of furfural. The lowest furfural reductase activity, however, was found after deletion of both genes as seen in Figure 3.

complete
CACAO 7933

enables

GO:0050580

2,5-didehydrogluconate reductase activity

PMID:19429550[1]

ECO:0000316

genetic interaction evidence used in manual assertion

UniProtKB:E2D2R2

F

Seeded From UniProt

complete

enables

GO:0050580

2,5-didehydrogluconate reductase activity

PMID:19429550[1]

ECO:0000316

genetic interaction evidence used in manual assertion

F

Seeded From UniProt

Missing: with/from

enables

GO:0016491

oxidoreductase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR018170
InterPro:IPR020471

F

Seeded From UniProt

complete

involved_in

GO:0055114

oxidation-reduction process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR018170
InterPro:IPR020471

P

Seeded From UniProt

complete

enables

GO:0050580

2,5-didehydrogluconate reductase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:1.1.1.274

F

Seeded From UniProt

complete

enables

GO:0016491

oxidoreductase activity

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0560

F

Seeded From UniProt

complete

involved_in

GO:0055114

oxidation-reduction process

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0560

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Miller, EN et al. (2009) Silencing of NADPH-dependent oxidoreductase genes (yqhD and dkgA) in furfural-resistant ethanologenic Escherichia coli. Appl. Environ. Microbiol. 75 4315-23 PubMed GONUTS page