GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
ECOLW:E0IUS3
Contents
| Species (Taxon ID) | Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666/ NRRL B-766 / W). (566546) | |
| Gene Name(s) | fnr (ECO:0000313 with EMBL:ADT74915.1) | |
| Protein Name(s) | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth (ECO:0000313 with EMBL:ADT74915.1)
Fumarate/nitrate reduction transcriptional regulator (ECO:0000313 with EMBL:AFH11062.1) Transcriptional regulator, Crp/Fnr family (ECO:0000313 with EMBL:EFN40120.1) | |
| External Links | ||
| UniProt | E0IUS3 | |
| EMBL | CP002185 CP002967 AEDF01000001 | |
| RefSeq | YP_006124157.1 YP_006172848.1 | |
| ProteinModelPortal | E0IUS3 | |
| SMR | E0IUS3 | |
| EnsemblBacteria | ADT74915 AFH11062 EFN40120 | |
| GeneID | 12695190 12753321 | |
| KEGG | ell:WFL_06985 elw:ECW_m1431 | |
| PATRIC | 41588869 | |
| KO | K01420 | |
| OMA | AIRTGFF | |
| Proteomes | UP000008525 UP000010107 | |
| GO | GO:0005622 GO:0003677 GO:0003700 GO:0006351 | |
| Gene3D | 1.10.10.10 2.60.120.10 | |
| InterPro | IPR018490 IPR000595 IPR012318 IPR014710 IPR001808 IPR018335 IPR011991 | |
| Pfam | PF00027 PF00325 | |
| PRINTS | PR00034 | |
| SMART | SM00100 SM00419 | |
| SUPFAM | SSF51206 | |
| PROSITE | PS50042 PS00042 PS51063 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
| GO:0005737 |
cytoplasm |
ECO:0000314 |
C |
Fig. 1. Activation of an FNR-dependent model promoter upon transfer to anaerobic conditions in the absence of de novo FNR synthesis. The expression of fnr in JRG5438 was controlled by the thermo-inducible (42 °C) promoter of pGS199, and FNR activity was reported by activation of the FNR-dependent FF-41.5 promoter fused to the reporter gene lacZ. |
complete | |||||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Dibden, DP & Green, J (2005) In vivo cycling of the Escherichia coli transcription factor FNR between active and inactive states. Microbiology (Reading, Engl.) 151 4063-70 PubMed GONUTS page
