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ECOLI:YPDB
Contents
Species (Taxon ID) | Escherichia coli (strain K12). (83333) | |
Gene Name(s) | ypdB | |
Protein Name(s) | Transcriptional regulatory protein YpdB | |
External Links | ||
UniProt | P0AE39 | |
EMBL | U00096 AP009048 | |
PIR | B65012 | |
RefSeq | NP_416882.1 YP_490623.1 | |
ProteinModelPortal | P0AE39 | |
SMR | P0AE39 | |
DIP | DIP-48228N | |
IntAct | P0AE39 | |
STRING | 511145.b2381 | |
PaxDb | P0AE39 | |
PRIDE | P0AE39 | |
EnsemblBacteria | AAC75440 BAA16251 | |
GeneID | 12931566 947395 | |
KEGG | ecj:Y75_p2348 eco:b2381 | |
PATRIC | 32120141 | |
EchoBASE | EB3901 | |
EcoGene | EG14149 | |
eggNOG | COG3279 | |
HOGENOM | HOG000242207 | |
InParanoid | P0AE39 | |
KO | K02477 | |
OMA | EFVMSMN | |
OrthoDB | EOG64R63J | |
PhylomeDB | P0AE39 | |
BioCyc | EcoCyc:G7244-MONOMER ECOL316407:JW2378-MONOMER | |
PRO | PR:P0AE39 | |
Proteomes | UP000000318 UP000000625 | |
Genevestigator | P0AE39 | |
GO | GO:0005737 GO:0003677 GO:0048870 GO:0000160 GO:1900192 GO:0006355 GO:0046677 GO:0006351 | |
InterPro | IPR011006 IPR007492 IPR001789 | |
Pfam | PF04397 PF00072 | |
SMART | SM00850 SM00448 | |
SUPFAM | SSF52172 | |
PROSITE | PS50930 PS50110 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG12006 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
EcoGene:EG14149 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000160 |
phosphorelay signal transduction system |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 2.0 2.1 Fried, L et al. (2013) Identification of a target gene and activating stimulus for the YpdA/YpdB histidine kinase/response regulator system in Escherichia coli. J. Bacteriol. 195 807-15 PubMed GONUTS page